RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 HDAC4P56524 1084 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 NCOA4Q13772 614 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 PRKG1Q13976 671 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 OXNAD1Q96HP4 312 aaPredicted RBP13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 CLMNQ96JQ2 1002 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 TMEM121Q9BTD3 319 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 PKD2L2Q9NZM6 624 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 ARMCX1Q9P291 453 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 PCDHA10Q9Y5I2 948 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 DGKIO75912 1065 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 AP3M2P53677 418 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 MTHFD1LQ6UB35 978 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 BRINP3Q76B58 766 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 LDHDQ86WU2 507 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 GIPC2Q8TF65 315 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 FRMD8Q9BZ67 464 aaPredicted RBP13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 RSAD1Q9HA92 442 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 ACTL7BQ9Y614 415 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 ADRA1DP25100 572 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 NUDT2P50583 147 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 COG2Q14746 738 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 FASTKD1Q53R41 847 aaKnown RBP13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 HGSNATQ68CP4 663 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 IRF2BP2Q7Z5L9 587 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 SETD3Q86TU7 594 aaPredicted RBP13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 CBWD2Q8IUF1 395 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 EXOC8Q8IYI6 725 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 CATSPER2Q96P56 530 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 NEUROG2Q9H2A3 272 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 TDRD3Q9H7E2 651 aaKnown RBP13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 FEM1BQ9UK73 627 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 GJA3Q9Y6H8 435 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 DIP2BQ9P265 1576 aa13.71□□□□□ -0.22
PCDHGB3-201ENST00000576222 GPR75-ASB3A0A0A6YYF3 556 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 DNALI1O14645 258 aaPredicted RBP13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 STIP1P31948 543 aaKnown RBP13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 PSMD7P51665 324 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 PTK6Q13882 451 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 PARP6Q2NL67 630 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 MTMR9Q96QG7 549 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 A8MUI8 341 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 PFDN6O15212 129 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 PDGFRAP16234 1089 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 TNFRSF25Q93038 417 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 MAML3Q96JK9 1138 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 POP1Q99575 1024 aaKnown RBP13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZNF341Q9BYN7 854 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 RAVER2Q9HCJ3 691 aaKnown RBP13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 SHOC2Q9UQ13 582 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 MAN1A2O60476 641 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 CHEK2O96017 543 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 CDK16Q00536 496 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 BLMHQ13867 455 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 COBLL1Q53SF7 1204 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 TFDP3Q5H9I0 405 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 PID1Q7Z2X4 250 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 VGLL2Q8N8G2 317 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 OR6B3Q8NGW1 331 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 HERC5Q9UII4 1024 aaKnown RBP13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 AKT3Q9Y243 479 aa13.7□□□□□ -0.22
PCDHGB3-201ENST00000576222 TLR2O60603 784 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 KRT36O76013 467 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 WFS1O76024 890 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 BNIP1Q12981 228 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 NIM1KQ8IY84 436 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 ART4Q93070 314 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 TAS2R14Q9NYV8 317 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 SOX13Q9UN79 622 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 TMEM131LA2VDJ0 1609 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 ASNSP08243 561 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 PSMC3P17980 439 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 RPA3P35244 121 aaPredicted RBP13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 MCL1Q07820 350 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 FUT2Q10981 343 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 NKX1-1Q15270 411 aaPredicted RBP13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZNF568Q3ZCX4 644 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 SLC26A11Q86WA9 606 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 LNX1Q8TBB1 728 aaPredicted RBP13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 PIK3R5Q8WYR1 880 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 LZICQ8WZA0 190 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 PGBD4Q96DM1 585 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 RIT2Q99578 217 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 DDX18Q9NVP1 670 aaKnown RBP13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 RPL26L1Q9UNX3 145 aaKnown RBP13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 TSC22D4Q9Y3Q8 395 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 E2F6O75461 281 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 ESRRBO95718 433 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 NLRP11P59045 1033 aaKnown RBP13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 OTUD4Q01804 1114 aaKnown RBP13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 INPP5AQ14642 412 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 SIX6OS1Q8N1H7 587 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 TTC8Q8TAM2 541 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 DNAJC19Q96DA6 116 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 UNC45AQ9H3U1 944 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 SLCO1B3Q9NPD5 702 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 PRR12Q9ULL5 1215 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 DNAJC16Q9Y2G8 782 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms