RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 UBE2HP62256 183 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 NCOA4Q13772 614 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 SOWAHAQ2M3V2 549 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 ISM2Q6H9L7 571 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 DPH6Q7L8W6 267 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 SPATA2LQ8IUW3 424 aaPredicted RBP16.35■□□□□ 0.21
SMG6-220ENST00000576218 SUGP1Q8IWZ8 645 aaKnown RBP16.35■□□□□ 0.21
SMG6-220ENST00000576218 ST13P5Q8NFI4 369 aaPredicted RBP16.35■□□□□ 0.21
SMG6-220ENST00000576218 OR6B3Q8NGW1 331 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 CXorf38Q8TB03 319 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 TMC2Q8TDI7 906 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 NXPE3Q969Y0 559 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 PBXIP1Q96AQ6 731 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 MCRS1Q96EZ8 462 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 GCNAQ96QF7 691 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 RTP3Q9BQQ7 232 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 IMPG2Q9BZV3 1241 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 MFSD1Q9H3U5 465 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 CEP72Q9P209 647 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 HCN4Q9Y3Q4 1203 aa16.35■□□□□ 0.21
SMG6-220ENST00000576218 CST3P01034 146 aaPredicted RBP16.34■□□□□ 0.21
SMG6-220ENST00000576218 P4HA1P13674 534 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 CEBPBP17676 345 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 PRCPP42785 496 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 NFIL3Q16649 462 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 SLC5A9Q2M3M2 681 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 EDRF1Q3B7T1 1238 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 ZNF667Q5HYK9 610 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 INTS6LQ5JSJ4 861 aaKnown RBP16.34■□□□□ 0.21
SMG6-220ENST00000576218 TDRD10Q5VZ19 366 aaKnown RBP16.34■□□□□ 0.21
SMG6-220ENST00000576218 SCARA3Q6AZY7 606 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 SCARA5Q6ZMJ2 495 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 NPAS3Q8IXF0 933 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 HS6ST3Q8IZP7 471 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 TTC9BQ8N6N2 239 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 CCDC150Q8NCX0 1101 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 RSAD2Q8WXG1 361 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 ZNF516Q92618 1163 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 SYT15Q9BQS2 421 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 PI4K2AQ9BTU6 479 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 CRISPLD1Q9H336 500 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 C11orf16Q9NQ32 467 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 HSFX1Q9UBD0 423 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 ASB3Q9Y575 518 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 NUMBLQ9Y6R0 609 aa16.34■□□□□ 0.21
SMG6-220ENST00000576218 MAPK13O15264 365 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 AKAP3O75969 853 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 VNN2O95498 520 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 FGF19O95750 216 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 PDGFRBP09619 1106 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 TRIM49P0CI25 452 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 TRIM49CP0CI26 452 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 TRIM21P19474 475 aaKnown RBP16.33■□□□□ 0.2
SMG6-220ENST00000576218 COL9A1P20849 921 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 PPP1R2P41236 205 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 PSMC1P62191 440 aaKnown RBP16.33■□□□□ 0.2
SMG6-220ENST00000576218 DLG4P78352 724 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 MAPRE1Q15691 268 aaKnown RBP16.33■□□□□ 0.2
SMG6-220ENST00000576218 ARHGAP15Q53QZ3 475 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 KLHL10Q6JEL2 608 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 C4orf50Q6ZRC1 276 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 OSTM1Q86WC4 334 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 PLEKHO2Q8TD55 490 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 TMEM174Q8WUU8 243 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 LPIN3Q9BQK8 851 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 SMOC2Q9H3U7 446 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 AVENQ9NQS1 362 aaPredicted RBP16.33■□□□□ 0.2
SMG6-220ENST00000576218 GDE1Q9NZC3 331 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 GTF3C4Q9UKN8 822 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 CDH9Q9ULB4 789 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 DUSP12Q9UNI6 340 aa16.33■□□□□ 0.2
SMG6-220ENST00000576218 BIN1O00499 593 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 STK25O00506 426 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 IKBKBO14920 756 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 STX10O60499 249 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 CFHP08603 1231 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 HAPLN1P10915 354 aaPredicted RBP16.32■□□□□ 0.2
SMG6-220ENST00000576218 WARSP23381 471 aaKnown RBP16.32■□□□□ 0.2
SMG6-220ENST00000576218 GNL1P36915 607 aaPredicted RBP16.32■□□□□ 0.2
SMG6-220ENST00000576218 RPL10AP62906 217 aaKnown RBP16.32■□□□□ 0.2
SMG6-220ENST00000576218 CYP27A1Q02318 531 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 HTR4Q13639 388 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 DCAF17Q5H9S7 520 aaPredicted RBP16.32■□□□□ 0.2
SMG6-220ENST00000576218 TCERG1LQ5VWI1 586 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 HFE2Q6ZVN8 426 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 LRRTM3Q86VH5 581 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 SCN4BQ8IWT1 228 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 ELOA2Q8IYF1 753 aaPredicted RBP16.32■□□□□ 0.2
SMG6-220ENST00000576218 GIPC2Q8TF65 315 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 PSMG2Q969U7 264 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 TCEAL4Q96EI5 215 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 EEF2KMTQ96G04 330 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 KXD1Q9BQD3 176 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 ATXN3LQ9H3M9 355 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 MAN1B1Q9UKM7 699 aa16.32■□□□□ 0.2
SMG6-220ENST00000576218 A0A1W2PRU2 124 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 A8MXQ7 604 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 HCRTO43612 131 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 GJA1P17302 382 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 ANXA13P27216 316 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms