RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 FUT10Q6P4F1 479 aa12.67□□□□□ -0.38
PRPF8-212ENST00000575116 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.67□□□□□ -0.38
PRPF8-212ENST00000575116 TRIM72Q6ZMU5 477 aa12.67□□□□□ -0.38
PRPF8-212ENST00000575116 OSTM1Q86WC4 334 aa12.67□□□□□ -0.38
PRPF8-212ENST00000575116 RNF168Q8IYW5 571 aaPredicted RBP12.67□□□□□ -0.38
PRPF8-212ENST00000575116 SLC30A5Q8TAD4 765 aa12.67□□□□□ -0.38
PRPF8-212ENST00000575116 HASPINQ8TF76 798 aa12.67□□□□□ -0.38
PRPF8-212ENST00000575116 HEXIM2Q96MH2 286 aaKnown RBP12.67□□□□□ -0.38
PRPF8-212ENST00000575116 TWNKQ96RR1 684 aa12.67□□□□□ -0.38
PRPF8-212ENST00000575116 EIF3CQ99613 913 aaKnown RBP12.67□□□□□ -0.38
PRPF8-212ENST00000575116 GPR62Q9BZJ7 368 aa12.67□□□□□ -0.38
PRPF8-212ENST00000575116 UBE2OQ9C0C9 1292 aaKnown RBP12.67□□□□□ -0.38
PRPF8-212ENST00000575116 DDX43Q9NXZ2 648 aaKnown RBP12.67□□□□□ -0.38
PRPF8-212ENST00000575116 ADAMTS1Q9UHI8 967 aa12.67□□□□□ -0.38
PRPF8-212ENST00000575116 PCDHGC3Q9UN70 934 aa12.67□□□□□ -0.38
PRPF8-212ENST00000575116 H7C4K7 107 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 I3L4J1 428 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 THAP12O43422 761 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 IPO7O95373 1038 aaKnown RBP12.66□□□□□ -0.38
PRPF8-212ENST00000575116 PDGFRBP09619 1106 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 GZMAP12544 262 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 CHRNB2P17787 502 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 PTPN1P18031 435 aaKnown RBP12.66□□□□□ -0.38
PRPF8-212ENST00000575116 LMO2P25791 158 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 KIF11P52732 1056 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 KRT83P78385 493 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 FMO1Q01740 532 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 KRT17Q04695 432 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 YWHAHQ04917 246 aaPredicted RBP12.66□□□□□ -0.38
PRPF8-212ENST00000575116 SPA17Q15506 151 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 USP41Q3LFD5 358 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 FAM171A1Q5VUB5 890 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 ARHGAP17Q68EM7 881 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 PPP1R2P3Q6NXS1 205 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 RAD9BQ6WBX8 426 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 DDX53Q86TM3 631 aaKnown RBP12.66□□□□□ -0.38
PRPF8-212ENST00000575116 ACOT1Q86TX2 421 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 GPR65Q8IYL9 337 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 TMEM169Q96HH4 297 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRPF8-212ENST00000575116 PLVAPQ9BX97 442 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 ZNF518BQ9C0D4 1074 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 LHX5Q9H2C1 402 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 HMGXB4Q9UGU5 601 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 PCDHA11Q9Y5I1 949 aa12.66□□□□□ -0.38
PRPF8-212ENST00000575116 TIMM13Q9Y5L4 95 aaPredicted RBP12.66□□□□□ -0.38
PRPF8-212ENST00000575116 A0A087X0T9 212 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.65□□□□□ -0.38
PRPF8-212ENST00000575116 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.65□□□□□ -0.38
PRPF8-212ENST00000575116 H0YGN5 161 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 DDX3XO00571 662 aaKnown RBP eCLIP12.65□□□□□ -0.38
PRPF8-212ENST00000575116 SOD2P04179 222 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 MMEP08473 750 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 LINC00271P0C7V0 271 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 FAM228BP0C875 321 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 CD19P15391 556 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 TKTP29401 623 aaKnown RBP12.65□□□□□ -0.38
PRPF8-212ENST00000575116 BMPR1AP36894 532 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 PLCB3Q01970 1234 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 MAPRE1Q15691 268 aaKnown RBP12.65□□□□□ -0.38
PRPF8-212ENST00000575116 LCLAT1Q6UWP7 414 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 ANKS3Q6ZW76 656 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 GLYCTKQ8IVS8 523 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 TXLNBQ8N3L3 684 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 B3GALNT2Q8NCR0 500 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 OLIG1Q8TAK6 271 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 SLC20A1Q8WUM9 679 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 BCL7CQ8WUZ0 217 aaPredicted RBP12.65□□□□□ -0.38
PRPF8-212ENST00000575116 TFAP2BQ92481 460 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 SAMD11Q96NU1 681 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 RTP3Q9BQQ7 232 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 SYT15Q9BQS2 421 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 TTPALQ9BTX7 342 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 PDCL3Q9H2J4 239 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 ACP6Q9NPH0 428 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 LUC7LQ9NQ29 371 aaKnown RBP12.65□□□□□ -0.38
PRPF8-212ENST00000575116 CHST7Q9NS84 486 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 PUF60Q9UHX1 559 aaKnown RBP12.65□□□□□ -0.38
PRPF8-212ENST00000575116 ZKSCAN5Q9Y2L8 839 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 NME7Q9Y5B8 376 aa12.65□□□□□ -0.38
PRPF8-212ENST00000575116 ATP8B3O60423 1300 aa12.64□□□□□ -0.39
PRPF8-212ENST00000575116 OR6C75A6NL08 312 aa12.64□□□□□ -0.39
PRPF8-212ENST00000575116 O00370 1275 aa12.64□□□□□ -0.39
PRPF8-212ENST00000575116 LSM8O95777 96 aaKnown RBP12.64□□□□□ -0.39
PRPF8-212ENST00000575116 CYP1A1P04798 512 aaPredicted RBP12.64□□□□□ -0.39
PRPF8-212ENST00000575116 RB1P06400 928 aa12.64□□□□□ -0.39
PRPF8-212ENST00000575116 BRD2P25440 801 aaKnown RBP12.64□□□□□ -0.39
PRPF8-212ENST00000575116 CDH5P33151 784 aaPredicted RBP12.64□□□□□ -0.39
PRPF8-212ENST00000575116 PBX3P40426 434 aa12.64□□□□□ -0.39
PRPF8-212ENST00000575116 TSPY1Q01534 308 aa12.64□□□□□ -0.39
PRPF8-212ENST00000575116 GFPT1Q06210 699 aaPredicted RBP12.64□□□□□ -0.39
PRPF8-212ENST00000575116 SMARCB1Q12824 385 aa12.64□□□□□ -0.39
PRPF8-212ENST00000575116 MTF1Q14872 753 aa12.64□□□□□ -0.39
PRPF8-212ENST00000575116 VARS2Q5ST30 1063 aaKnown RBP12.64□□□□□ -0.39
PRPF8-212ENST00000575116 TAF3Q5VWG9 929 aa12.64□□□□□ -0.39
PRPF8-212ENST00000575116 ZNF280DQ6N043 979 aa12.64□□□□□ -0.39
PRPF8-212ENST00000575116 ALKBH5Q6P6C2 394 aaKnown RBP12.64□□□□□ -0.39
PRPF8-212ENST00000575116 FAM171BQ6P995 826 aa12.64□□□□□ -0.39
PRPF8-212ENST00000575116 TMEM173Q86WV6 379 aaPredicted RBP12.64□□□□□ -0.39
PRPF8-212ENST00000575116 CEP57Q86XR8 500 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms