RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 ADGRD2Q7Z7M1 963 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 OR6B3Q8NGW1 331 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 WHAMMQ8TF30 809 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 PPP2R3CQ969Q6 453 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 LSM14BQ9BX40 385 aaKnown RBP19.42■□□□□ 0.7
CCDC40-213ENST00000574933 NAA15Q9BXJ9 866 aaKnown RBP19.42■□□□□ 0.7
CCDC40-213ENST00000574933 GANQ9H2C0 597 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 SNX25Q9H3E2 840 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 CISHQ9NSE2 258 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 IFNKQ9P0W0 207 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 CDH9Q9ULB4 789 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 CNTN6Q9UQ52 1028 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 CDY1Q9Y6F8 540 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 GREB1Q4ZG55 1949 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 FSD2A1L4K1 749 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 CLASP2O75122 1294 aaKnown RBP19.41■□□□□ 0.7
CCDC40-213ENST00000574933 ABLIM3O94929 683 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 LMO2P25791 158 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 OR1D2P34982 312 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 MFAP3P55082 362 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 APBA1Q02410 837 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 GPR17Q13304 367 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 KCNC3Q14003 757 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 INTS6LQ5JSJ4 861 aaKnown RBP19.41■□□□□ 0.7
CCDC40-213ENST00000574933 TPGS2Q68CL5 300 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 FAM171BQ6P995 826 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 LILRA6Q6PI73 481 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 RRAGAQ7L523 313 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 PPFIBP1Q86W92 1011 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 CRYBG2Q8N1P7 616 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 KAT5Q92993 513 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 UBE2TQ9NPD8 197 aaPredicted RBP19.41■□□□□ 0.7
CCDC40-213ENST00000574933 MAFFQ9ULX9 164 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 DOCK6Q96HP0 2047 aa19.41■□□□□ 0.7
CCDC40-213ENST00000574933 A8MXQ7 604 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 CBFA2T2O43439 604 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 UCHL3P15374 230 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 KLK7P49862 253 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 NDST1P52848 882 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 TSPY1Q01534 308 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 ROR1Q01973 937 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 SMARCB1Q12824 385 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 COL19A1Q14993 1142 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 TCEAL5Q5H9L2 206 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 DCP1BQ8IZD4 617 aaKnown RBP19.4■□□□□ 0.7
CCDC40-213ENST00000574933 ZNF461Q8TAF7 563 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 SLC22A17Q8WUG5 538 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 MYLIPQ8WY64 445 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 SHC3Q92529 594 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 SYT15Q9BQS2 421 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 XPO4Q9C0E2 1151 aaKnown RBP19.4■□□□□ 0.7
CCDC40-213ENST00000574933 TLE6Q9H808 572 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 DNAJC12Q9UKB3 198 aa19.4■□□□□ 0.7
CCDC40-213ENST00000574933 ZNF638Q14966 1978 aaKnown RBP19.4■□□□□ 0.7
CCDC40-213ENST00000574933 WDR27A2RRH5 827 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 HCRTO43612 131 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 TPM3P06753 285 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 KLRC2P26717 231 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 CLCN4P51793 760 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 IQCEQ6IPM2 695 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 GJB7Q6PEY0 223 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 LRRTM3Q86VH5 581 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 TNIP3Q96KP6 325 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 TWNKQ96RR1 684 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 TMEM209Q96SK2 561 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 NT5C1AQ9BXI3 368 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 CRTAC1Q9NQ79 661 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 HMGXB4Q9UGU5 601 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 AFF4Q9UHB7 1163 aaKnown RBP19.39■□□□□ 0.69
CCDC40-213ENST00000574933 AJAP1Q9UKB5 411 aaPredicted RBP19.39■□□□□ 0.69
CCDC40-213ENST00000574933 FHOD1Q9Y613 1164 aa19.39■□□□□ 0.69
CCDC40-213ENST00000574933 EPHB6O15197 1021 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 AP5Z1O43299 807 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 CSPG5O95196 566 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 PDGFRBP09619 1106 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 PTPN1P18031 435 aaKnown RBP19.38■□□□□ 0.69
CCDC40-213ENST00000574933 CD58P19256 250 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 IGFBP4P22692 258 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 ACAT1P24752 427 aaKnown RBP19.38■□□□□ 0.69
CCDC40-213ENST00000574933 CA8P35219 290 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 ZNF132P52740 706 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 RAD23BP54727 409 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 HYAL1Q12794 435 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 MAPRE1Q15691 268 aaKnown RBP19.38■□□□□ 0.69
CCDC40-213ENST00000574933 NFE2Q16621 373 aaPredicted RBP19.38■□□□□ 0.69
CCDC40-213ENST00000574933 FIGNQ5HY92 759 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 TMEM184AQ6ZMB5 413 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 EFHBQ8N7U6 833 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 B3GALNT2Q8NCR0 500 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 NEK11Q8NG66 645 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 PATJQ8NI35 1801 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 MYCBPAPQ8TBZ2 947 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 C2orf15Q8WU43 125 aaKnown RBP19.38■□□□□ 0.69
CCDC40-213ENST00000574933 HDAC7Q8WUI4 952 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 STK33Q9BYT3 514 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 EDEM3Q9BZQ6 932 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 ELOVL4Q9GZR5 314 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 DNAI2Q9GZS0 605 aa19.38■□□□□ 0.69
CCDC40-213ENST00000574933 FAM207AQ9NSI2 230 aaPredicted RBP19.38■□□□□ 0.69
CCDC40-213ENST00000574933 HSFX1Q9UBD0 423 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms