RNA–Protein interactions for RNA: ENST00000569341.1

CFDP1-208, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-208ENST00000569341 CLEC14AQ86T13 490 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 AOPEPQ8N6M6 819 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 MLKLQ8NB16 471 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 MDGA1Q8NFP4 955 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 PROKR1Q8TCW9 393 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 ATXN2LQ8WWM7 1075 aaKnown RBP4.71□□□□□ -1.66
CFDP1-208ENST00000569341 APPBP2Q92624 585 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 ZNF496Q96IT1 587 aaPredicted RBP4.71□□□□□ -1.66
CFDP1-208ENST00000569341 UBA5Q9GZZ9 404 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 TMX1Q9H3N1 280 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 GOLPH3LQ9H4A5 285 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 PCIF1Q9H4Z3 704 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 RBM28Q9NW13 759 aaKnown RBP4.71□□□□□ -1.66
CFDP1-208ENST00000569341 RAI14Q9P0K7 980 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 PTGFRNQ9P2B2 879 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 ORC3Q9UBD5 711 aaPredicted RBP4.71□□□□□ -1.66
CFDP1-208ENST00000569341 ZNHIT2Q9UHR6 403 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 ZNF215Q9UL58 517 aaPredicted RBP4.71□□□□□ -1.66
CFDP1-208ENST00000569341 HPSEQ9Y251 543 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.71□□□□□ -1.663e-6■□□□□ 8.5
CFDP1-208ENST00000569341 PTCH2Q9Y6C5 1203 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 COL16A1Q07092 1604 aaPredicted RBP4.71□□□□□ -1.66
CFDP1-208ENST00000569341 MAST3O60307 1309 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 SPATA31A5Q5VU36 1347 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 SPATA31A7Q8IWB4 1347 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 STK36Q9NRP7 1315 aa4.71□□□□□ -1.66
CFDP1-208ENST00000569341 BCL9LQ86UU0 1499 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 PHLPP1O60346 1717 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 CCDC196A0A1B0GTZ2 297 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 UBA6A0AVT1 1052 aaPredicted RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 MASP2O00187 686 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 EXOC5O00471 708 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 ZNF213O14771 459 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 PRC1O43663 620 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 ZRANB2O95218 330 aaKnown RBP eCLIP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 SMC2O95347 1197 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 BMP15O95972 392 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 PCCAP05165 728 aaPredicted RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 ITGB1P05556 798 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 FDPSP14324 419 aaKnown RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 FNTBP49356 437 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 NT5C2P49902 561 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 NDUFA8P51970 172 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 PTTG1IPP53801 180 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 KRTAP10-11P60412 298 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 GPS2Q13227 327 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 UBE3CQ15386 1083 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 ZKSCAN8Q15776 578 aaPredicted RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 WDR78Q5VTH9 848 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 DDX46Q7L014 1031 aaKnown RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 ZNF771Q7L3S4 317 aaPredicted RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 OTOP1Q7RTM1 612 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 DDX53Q86TM3 631 aaKnown RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 CXorf67Q86X51 503 aaPredicted RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 NBPF5PQ86XG9 351 aaPredicted RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 MB21D2Q8IYB1 491 aaPredicted RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 NME8Q8N427 588 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 PLA2G15Q8NCC3 412 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 THAP3Q8WTV1 239 aaPredicted RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 UBXN4Q92575 508 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 PPP1R13BQ96KQ4 1090 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 TCEANC2Q96MN5 208 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 PYM1Q9BRP8 204 aaKnown RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 NAA15Q9BXJ9 866 aaKnown RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 XPO4Q9C0E2 1151 aaKnown RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 RIOX1Q9H6W3 641 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 NCOA5Q9HCD5 579 aaKnown RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 TRIM39Q9HCM9 518 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 POLR3BQ9NW08 1133 aaPredicted RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 CALCOCO1Q9P1Z2 691 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 NCDNQ9UBB6 729 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 DNAI1Q9UI46 699 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 THRAP3Q9Y2W1 955 aaKnown RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 USP16Q9Y5T5 823 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 KDM6AO15550 1401 aaPredicted RBP4.7□□□□□ -1.66
CFDP1-208ENST00000569341 SPATA31A1Q5TZJ5 1347 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 CDHR2Q9BYE9 1310 aa4.7□□□□□ -1.66
CFDP1-208ENST00000569341 MARF1Q9Y4F3 1742 aaKnown RBP4.69□□□□□ -1.66
CFDP1-208ENST00000569341 NID2Q14112 1375 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 SLIT2O94813 1529 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 CCDC163A0A0D9SF12 145 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 KLF18A0A0U1RQI7 1052 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 A0A1B0GUL7 405 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 SERPINC1P01008 464 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 CSF1RP07333 972 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 UQCRFS1P1P0C7P4 283 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 VSIG10L2P0DP72 767 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 TOP1P11387 765 aaKnown RBP4.69□□□□□ -1.66
CFDP1-208ENST00000569341 MYL6BP14649 208 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 IL2RBP14784 551 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 PFKFB1P16118 471 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 GNAT2P19087 354 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 LIFRP42702 1097 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 SYKP43405 635 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 PIP4K2AP48426 406 aaPredicted RBP4.69□□□□□ -1.66
CFDP1-208ENST00000569341 CLK3P49761 638 aaKnown RBP4.69□□□□□ -1.66
CFDP1-208ENST00000569341 UBASH3AP57075 661 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 KIF23Q02241 960 aaPredicted RBP4.69□□□□□ -1.66
CFDP1-208ENST00000569341 PTPAQ15257 358 aa4.69□□□□□ -1.66
CFDP1-208ENST00000569341 SAFBQ15424 915 aaKnown RBP eCLIP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms