RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 MCM2P49736 904 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 ACOT2P49753 483 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 LIG4P49917 911 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 WNT7BP56706 349 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 ORC2Q13416 577 aaPredicted RBP16.1■□□□□ 0.17
USB1-214ENST00000568848 PDIA5Q14554 519 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 ZPBP2Q6X784 338 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 USP13Q92995 863 aaPredicted RBP16.1■□□□□ 0.17
USB1-214ENST00000568848 E2F7Q96AV8 911 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 NTPCRQ9BSD7 190 aaKnown RBP16.1■□□□□ 0.17
USB1-214ENST00000568848 ZCWPW1Q9H0M4 648 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 FAM208BQ5VWN6 2430 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 VWA3AA6NCI4 1184 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 K7ENM7 598 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 KCNK5O95279 499 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 ZNF806P0C7X5 589 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 TYMPP19971 482 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 NCKAP1LP55160 1127 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 MLLT6P55198 1093 aaPredicted RBP16.09■□□□□ 0.17
USB1-214ENST00000568848 MYBPC2Q14324 1141 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 ARHGAP15Q53QZ3 475 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 TMEM196Q5HYL7 178 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 SPATA1Q5VX52 437 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 WSCD1Q658N2 575 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 DTHD1Q6ZMT9 781 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 CACNA2D4Q7Z3S7 1137 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 HAUS6Q7Z4H7 955 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 SYT2Q8N9I0 419 aaPredicted RBP16.09■□□□□ 0.17
USB1-214ENST00000568848 FAM184AQ8NB25 1140 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 ZSWIM2Q8NEG5 633 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 MSANTD3Q96H12 275 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 SLC22A12Q96S37 553 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 FAM83CQ9BQN1 747 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 REEP2Q9BRK0 252 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 PYM1Q9BRP8 204 aaKnown RBP16.09■□□□□ 0.17
USB1-214ENST00000568848 RPF1Q9H9Y2 349 aaKnown RBP16.09■□□□□ 0.17
USB1-214ENST00000568848 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.09■□□□□ 0.17
USB1-214ENST00000568848 MAFFQ9ULX9 164 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 MAGED2Q9UNF1 606 aaPredicted RBP16.09■□□□□ 0.17
USB1-214ENST00000568848 LIMCH1Q9UPQ0 1083 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 SLC8A2Q9UPR5 921 aa16.09■□□□□ 0.17
USB1-214ENST00000568848 KIAA1549LQ6ZVL6 1849 aa16.08■□□□□ 0.17
USB1-214ENST00000568848 PATE3B3GLJ2 98 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 HNRNPDLO14979 420 aaKnown RBP16.08■□□□□ 0.16
USB1-214ENST00000568848 TADA3O75528 432 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 ODC1P11926 461 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 HMGA1P17096 107 aaKnown RBP16.08■□□□□ 0.16
USB1-214ENST00000568848 TRAPPC10P48553 1259 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 GALK1P51570 392 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 RUNX3Q13761 415 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 PLK5Q496M5 336 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 PLA2G2CQ5R387 149 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 ARMCX5Q6P1M9 558 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 CMTM8Q8IZV2 173 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 RPLP0P6Q8NHW5 317 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 PI4K2AQ9BTU6 479 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 MSTO1Q9BUK6 570 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 TPSD1Q9BZJ3 242 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 DUSP15Q9H1R2 295 aaPredicted RBP16.08■□□□□ 0.16
USB1-214ENST00000568848 ZHX3Q9H4I2 956 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 PLEKHA5Q9HAU0 1116 aa16.08■□□□□ 0.16
USB1-214ENST00000568848 C4orf47A7E2U8 309 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 PIRO00625 290 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 CYB561D2O14569 222 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 SCAMP3O14828 347 aaKnown RBP16.07■□□□□ 0.16
USB1-214ENST00000568848 CYP3A5P20815 502 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 ACAT1P24752 427 aaKnown RBP16.07■□□□□ 0.16
USB1-214ENST00000568848 LIMK1P53667 647 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 NLRP12P59046 1061 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 CREB5Q02930 508 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 GRIN1Q05586 938 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 FOXC1Q12948 553 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 PSMD2Q13200 908 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 TAF12Q16514 161 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 TMEM119Q4V9L6 283 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 ZC2HC1CQ53FD0 456 aaPredicted RBP16.07■□□□□ 0.16
USB1-214ENST00000568848 RNF43Q68DV7 783 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 ITIH5Q86UX2 942 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 GPBP1Q86WP2 473 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 SFTPA1Q8IWL2 248 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 EFCAB13Q8IY85 973 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 CYP2S1Q96SQ9 504 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 EDEM2Q9BV94 578 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 CPSF3Q9UKF6 684 aaKnown RBP16.07■□□□□ 0.16
USB1-214ENST00000568848 TBX20Q9UMR3 447 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 WNT6Q9Y6F9 365 aa16.07■□□□□ 0.16
USB1-214ENST00000568848 OGTO15294 1046 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 F11P03951 625 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 HAPLN1P10915 354 aaPredicted RBP16.06■□□□□ 0.16
USB1-214ENST00000568848 BCKDHBP21953 392 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 HOXA6P31267 233 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 SMTNP53814 917 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 GRSF1Q12849 480 aaKnown RBP eCLIP16.06■□□□□ 0.16
USB1-214ENST00000568848 TMEM132DQ14C87 1099 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 VEPH1Q14D04 833 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 DDR2Q16832 855 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 MCTP1Q6DN14 999 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 MYCT1Q8N699 235 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 GCNAQ96QF7 691 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 LSM14BQ9BX40 385 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms