RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	CGRRF1	Q99675	332 aa		11.13	□□□□□ -0.63
UBR1-207	ENST00000568782	KXD1	Q9BQD3	176 aa		11.13	□□□□□ -0.63
UBR1-207	ENST00000568782	GTPBP4	Q9BZE4	634 aa	Known RBP	11.13	□□□□□ -0.63
UBR1-207	ENST00000568782	DNAI2	Q9GZS0	605 aa		11.13	□□□□□ -0.63
UBR1-207	ENST00000568782	SNX25	Q9H3E2	840 aa		11.13	□□□□□ -0.63
UBR1-207	ENST00000568782	ATXN3L	Q9H3M9	355 aa		11.13	□□□□□ -0.63
UBR1-207	ENST00000568782	SMOC2	Q9H3U7	446 aa		11.13	□□□□□ -0.63
UBR1-207	ENST00000568782	GDPD2	Q9HCC8	539 aa		11.13	□□□□□ -0.63
UBR1-207	ENST00000568782	SLC2A4RG	Q9NR83	387 aa		11.13	□□□□□ -0.63
UBR1-207	ENST00000568782	CEP72	Q9P209	647 aa		11.13	□□□□□ -0.63
UBR1-207	ENST00000568782	ZMYM5	Q9UJ78	669 aa		11.13	□□□□□ -0.63
UBR1-207	ENST00000568782	MYH10	P35580	1976 aa		11.13	□□□□□ -0.63
UBR1-207	ENST00000568782	MIA3	Q5JRA6	1907 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	FAM237A	A0A1B0GTK4	181 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	NCAM2	O15394	837 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	SMC2	O95347	1197 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	CSH1	P0DML2	217 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	CSH2	P0DML3	217 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	KRT13	P13646	458 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	P4HA1	P13674	534 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	CEBPB	P17676	345 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	CDC25C	P30307	473 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	ATIC	P31939	592 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	HOXD13	P35453	343 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	SLC5A9	Q2M3M2	681 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	CEP135	Q66GS9	1140 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	HS6ST3	Q8IZP7	471 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	CCDC150	Q8NCX0	1101 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	OR5B17	Q8NGF7	314 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	OR10T2	Q8NGX3	314 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	GPR152	Q8TDT2	470 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	SMARCD2	Q92925	531 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	BORCS6	Q96GS4	357 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	TMEM209	Q96SK2	561 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	TRMT61B	Q9BVS5	477 aa	Known RBP	11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	IMPG2	Q9BZV3	1241 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	BRD9	Q9H8M2	597 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	ARHGEF3	Q9NR81	526 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	UXT	Q9UBK9	157 aa	Predicted RBP	11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	L1RE1	Q9UN81	338 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	MRPS17	Q9Y2R5	130 aa	Known RBP	11.12	□□□□□ -0.63
UBR1-207	ENST00000568782	KMT2E	Q8IZD2	1858 aa		11.12	□□□□□ -0.63
UBR1-207	ENST00000568782		A0A1W2PRU2	124 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	KLRC4	O43908	158 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	RHOBTB3	O94955	611 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	PDGFB	P01127	241 aa	Predicted RBP	11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	NR3C1	P04150	777 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	FAM163B	P0C2L3	166 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	HAPLN1	P10915	354 aa	Predicted RBP	11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	AOC1	P19801	751 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	ANXA13	P27216	316 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	GABRR2	P28476	465 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	EPHA5	P54756	1037 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	WNT7B	P56706	349 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	GPC5	P78333	572 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	PRKCQ	Q04759	706 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	KCNB1	Q14721	858 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	TEAD2	Q15562	447 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	WDR72	Q3MJ13	1102 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	INTS6L	Q5JSJ4	861 aa	Known RBP	11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	PRSS36	Q5K4E3	855 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	SLC9A9	Q8IVB4	645 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	KIAA0895	Q8NCT3	520 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	OR6B3	Q8NGW1	331 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	DEPDC1B	Q8WUY9	529 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	IRF7	Q92985	503 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	TCEAL4	Q96EI5	215 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	PI4K2A	Q9BTU6	479 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	ABCB6	Q9NP58	842 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	EHD2	Q9NZN4	543 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	CDH9	Q9ULB4	789 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	SIT1	Q9Y3P8	196 aa		11.11	□□□□□ -0.63
UBR1-207	ENST00000568782	ZNF318	Q5VUA4	2279 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	DENND4C	Q5VZ89	1909 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	ZNF263	O14978	683 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	PSMC3	P17980	439 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	NR2F2	P24468	414 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	ACAT1	P24752	427 aa	Known RBP	11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	GNL1	P36915	607 aa	Predicted RBP	11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	VCP	P55072	806 aa	Known RBP	11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	DPYD	Q12882	1025 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	STIM1	Q13586	685 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	MLF2	Q15773	248 aa	Predicted RBP	11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	SOWAHA	Q2M3V2	549 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	SLC44A4	Q53GD3	710 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	ZNF667	Q5HYK9	610 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	FAM78A	Q5JUQ0	283 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	GPR158	Q5T848	1215 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	TANGO2	Q6ICL3	276 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	PHLDB3	Q6NSJ2	640 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	SCN4B	Q8IWT1	228 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	GUF1	Q8N442	669 aa	Known RBP	11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	CSGALNACT1	Q8TDX6	532 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	GIPC2	Q8TF65	315 aa		11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	MRPS31	Q92665	395 aa	Known RBP	11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	ATOH1	Q92858	354 aa	Predicted RBP	11.1	□□□□□ -0.63
UBR1-207	ENST00000568782	SMARCE1	Q969G3	411 aa		11.1	□□□□□ -0.63

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