RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 PNMA6AP0CW24 399 aaPredicted RBP8.19□□□□□ -1.1
SCAPER-221ENST00000568549 ACAT1P24752 427 aaKnown RBP8.19□□□□□ -1.1
SCAPER-221ENST00000568549 LMO2P25791 158 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 PCSK1P29120 753 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 CASP14P31944 242 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 SOX5P35711 763 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 USP8P40818 1118 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 STAT1P42224 750 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 JAM2P57087 298 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 ERVFC1P60507 584 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 ZBED6P86452 979 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 TSPY1Q01534 308 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 CREMQ03060 361 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 ORC1Q13415 861 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 MRPL58Q14197 206 aaKnown RBP8.19□□□□□ -1.1
SCAPER-221ENST00000568549 SMC1AQ14683 1233 aaKnown RBP8.19□□□□□ -1.1
SCAPER-221ENST00000568549 PTPN14Q15678 1187 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 PSMD5Q16401 504 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 ZNF394Q53GI3 561 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 KIAA0319Q5VV43 1072 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 PLPP4Q5VZY2 271 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 SMYD5Q6GMV2 418 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 TMEM270Q6UE05 265 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 PRSS55Q6UWB4 352 aaPredicted RBP8.19□□□□□ -1.1
SCAPER-221ENST00000568549 TMC7Q7Z402 723 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 GPR65Q8IYL9 337 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 SPC24Q8NBT2 197 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 RBBP8NLQ8NC74 664 aaPredicted RBP8.19□□□□□ -1.1
SCAPER-221ENST00000568549 LNX1Q8TBB1 728 aaPredicted RBP8.19□□□□□ -1.1
SCAPER-221ENST00000568549 GDPD5Q8WTR4 605 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 CPLX3Q8WVH0 158 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 AUTS2Q8WXX7 1259 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 BAP1Q92560 729 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 TWNKQ96RR1 684 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 TCF25Q9BQ70 676 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 RTP3Q9BQQ7 232 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 ACBD6Q9BR61 282 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 NT5C1AQ9BXI3 368 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 OXCT2Q9BYC2 517 aaPredicted RBP8.19□□□□□ -1.1
SCAPER-221ENST00000568549 ELOVL4Q9GZR5 314 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 LMAN2LQ9H0V9 348 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 DPEP3Q9H4B8 488 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 ZNF576Q9H609 170 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.19□□□□□ -1.1
SCAPER-221ENST00000568549 CHD7Q9P2D1 2997 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 MTRRQ9UBK8 725 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 CDH9Q9ULB4 789 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 MYO6Q9UM54 1294 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 CAPN11Q9UMQ6 739 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 CNTN6Q9UQ52 1028 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 STXBP5LQ9Y2K9 1186 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 LUC7L2Q9Y383 392 aaKnown RBP8.19□□□□□ -1.1
SCAPER-221ENST00000568549 NME7Q9Y5B8 376 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 TRIOBPQ9H2D6 2365 aa8.19□□□□□ -1.1
SCAPER-221ENST00000568549 PATJQ8NI35 1801 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.18□□□□□ -1.1
SCAPER-221ENST00000568549 EPOPA6NHQ4 379 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 LRRC53A6NM62 1247 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 GOLGA6L6A8MZA4 724 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 AKR1B15C9JRZ8 316 aaPredicted RBP8.18□□□□□ -1.1
SCAPER-221ENST00000568549 RNF225M0QZC1 329 aaPredicted RBP8.18□□□□□ -1.1
SCAPER-221ENST00000568549 SOX1O00570 391 aaPredicted RBP8.18□□□□□ -1.1
SCAPER-221ENST00000568549 FSCN2O14926 492 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 CYP26A1O43174 497 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 LPXNO60711 386 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 MFAP3LO75121 409 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 ATP2C2O75185 946 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 GFPT2O94808 682 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 CXCL14O95715 111 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 CPB1P15086 417 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 KRT9P35527 623 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 FXR1P51114 621 aaKnown RBP eCLIP8.18□□□□□ -1.1
SCAPER-221ENST00000568549 ZNF132P52740 706 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 RAD23BP54727 409 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 ARPP19P56211 112 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 PSMC1P62191 440 aaKnown RBP8.18□□□□□ -1.1
SCAPER-221ENST00000568549 TBX2Q13207 712 aaPredicted RBP8.18□□□□□ -1.1
SCAPER-221ENST00000568549 INTS6LQ5JSJ4 861 aaKnown RBP8.18□□□□□ -1.1
SCAPER-221ENST00000568549 SFMBT2Q5VUG0 894 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 PDE12Q6L8Q7 609 aaKnown RBP8.18□□□□□ -1.1
SCAPER-221ENST00000568549 ACOT1Q86TX2 421 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 CNGA4Q8IV77 575 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 FMNL3Q8IVF7 1028 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 GLYCTKQ8IVS8 523 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 FAM71AQ8IYT1 594 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 SLC4A11Q8NBS3 891 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 B3GALNT2Q8NCR0 500 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 OR10T2Q8NGX3 314 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 MICAL1Q8TDZ2 1067 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 WHAMMQ8TF30 809 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 TMEM176AQ96HP8 235 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 TNIP3Q96KP6 325 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 TMEM209Q96SK2 561 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 SYT15Q9BQS2 421 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 ZCWPW1Q9H0M4 648 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 NUCKS1Q9H1E3 243 aaKnown RBP8.18□□□□□ -1.1
SCAPER-221ENST00000568549 NGRNQ9NPE2 291 aaKnown RBP8.18□□□□□ -1.1
SCAPER-221ENST00000568549 FNIP2Q9P278 1114 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 IMPACTQ9P2X3 320 aa8.18□□□□□ -1.1
SCAPER-221ENST00000568549 BACE2Q9Y5Z0 518 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms