RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 MFSD1Q9H3U5 465 aa20.73■□□□□ 0.91
CCDC113-204ENST00000566498 HSFX1Q9UBD0 423 aa20.73■□□□□ 0.91
CCDC113-204ENST00000566498 DUSP12Q9UNI6 340 aa20.73■□□□□ 0.91
CCDC113-204ENST00000566498 TRAF3IP3Q9Y228 551 aa20.73■□□□□ 0.91
CCDC113-204ENST00000566498 ASB3Q9Y575 518 aa20.73■□□□□ 0.91
CCDC113-204ENST00000566498 PCDHB5Q9Y5E4 795 aa20.73■□□□□ 0.91
CCDC113-204ENST00000566498 CFHP08603 1231 aa20.72■□□□□ 0.91
CCDC113-204ENST00000566498 CEBPBP17676 345 aa20.72■□□□□ 0.91
CCDC113-204ENST00000566498 RPL13P26373 211 aaKnown RBP20.72■□□□□ 0.91
CCDC113-204ENST00000566498 AP3M2P53677 418 aa20.72■□□□□ 0.91
CCDC113-204ENST00000566498 NFE2Q16621 373 aaPredicted RBP20.72■□□□□ 0.91
CCDC113-204ENST00000566498 WDR72Q3MJ13 1102 aa20.72■□□□□ 0.91
CCDC113-204ENST00000566498 PRSS36Q5K4E3 855 aa20.72■□□□□ 0.91
CCDC113-204ENST00000566498 DNAJB7Q7Z6W7 309 aaPredicted RBP20.72■□□□□ 0.91
CCDC113-204ENST00000566498 ITIH5Q86UX2 942 aa20.72■□□□□ 0.91
CCDC113-204ENST00000566498 SMYD4Q8IYR2 804 aaPredicted RBP20.72■□□□□ 0.91
CCDC113-204ENST00000566498 SPPL2BQ8TCT7 592 aa20.72■□□□□ 0.91
CCDC113-204ENST00000566498 TMEM174Q8WUU8 243 aa20.72■□□□□ 0.91
CCDC113-204ENST00000566498 ERCC4Q92889 916 aaPredicted RBP20.72■□□□□ 0.91
CCDC113-204ENST00000566498 SMARCE1Q969G3 411 aa20.72■□□□□ 0.91
CCDC113-204ENST00000566498 TIGD1Q96MW7 591 aa20.72■□□□□ 0.91
CCDC113-204ENST00000566498 GTF3C4Q9UKN8 822 aa20.72■□□□□ 0.91
CCDC113-204ENST00000566498 TSC2P49815 1807 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 MICAL2O94851 1124 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 PDGFBP01127 241 aaPredicted RBP20.71■□□□□ 0.91
CCDC113-204ENST00000566498 PDGFRBP09619 1106 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 GJA1P17302 382 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 NR2F2P24468 414 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 PCSK1P29120 753 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 CCR2P41597 374 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 MYL6P60660 151 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 TNNC1P63316 161 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 ADAM9Q13443 819 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 VEPH1Q14D04 833 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 OSTM1Q86WC4 334 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 SPATA18Q8TC71 538 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 PLEKHO2Q8TD55 490 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 GIPC2Q8TF65 315 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 GSDMAQ96QA5 445 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 KXD1Q9BQD3 176 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 PI4K2AQ9BTU6 479 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 GZF1Q9H116 711 aaPredicted RBP20.71■□□□□ 0.91
CCDC113-204ENST00000566498 DNAJC25Q9H1X3 360 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 TMLHEQ9NVH6 421 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 CHMP5Q9NZZ3 219 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 NXF1Q9UBU9 619 aaKnown RBP20.71■□□□□ 0.91
CCDC113-204ENST00000566498 PCDHA5Q9Y5H7 936 aa20.71■□□□□ 0.91
CCDC113-204ENST00000566498 LRRIQ3A6PVS8 624 aaPredicted RBP20.7■□□□□ 0.9
CCDC113-204ENST00000566498 STK25O00506 426 aa20.7■□□□□ 0.9
CCDC113-204ENST00000566498 GABRDO14764 452 aa20.7■□□□□ 0.9
CCDC113-204ENST00000566498 KINO60870 393 aaKnown RBP20.7■□□□□ 0.9
CCDC113-204ENST00000566498 GADD45BO75293 160 aaPredicted RBP20.7■□□□□ 0.9
CCDC113-204ENST00000566498 HAPLN1P10915 354 aaPredicted RBP20.7■□□□□ 0.9
CCDC113-204ENST00000566498 SRFP11831 508 aa20.7■□□□□ 0.9
CCDC113-204ENST00000566498 LMO2P25791 158 aa20.7■□□□□ 0.9
CCDC113-204ENST00000566498 GNL1P36915 607 aaPredicted RBP20.7■□□□□ 0.9
CCDC113-204ENST00000566498 DLG4P78352 724 aa20.7■□□□□ 0.9
CCDC113-204ENST00000566498 TMC2Q8TDI7 906 aa20.7■□□□□ 0.9
CCDC113-204ENST00000566498 PSMG2Q969U7 264 aa20.7■□□□□ 0.9
CCDC113-204ENST00000566498 SYAP1Q96A49 352 aaPredicted RBP20.7■□□□□ 0.9
CCDC113-204ENST00000566498 SNX25Q9H3E2 840 aa20.7■□□□□ 0.9
CCDC113-204ENST00000566498 SLITRK6Q9H5Y7 841 aa20.7■□□□□ 0.9
CCDC113-204ENST00000566498 HCRTO43612 131 aa20.69■□□□□ 0.9
CCDC113-204ENST00000566498 C4BPAP04003 597 aaKnown RBP20.69■□□□□ 0.9
CCDC113-204ENST00000566498 ATICP31939 592 aa20.69■□□□□ 0.9
CCDC113-204ENST00000566498 PRCPP42785 496 aa20.69■□□□□ 0.9
CCDC113-204ENST00000566498 EPHA5P54756 1037 aa20.69■□□□□ 0.9
CCDC113-204ENST00000566498 CLDN10P78369 228 aa20.69■□□□□ 0.9
CCDC113-204ENST00000566498 TEAD2Q15562 447 aa20.69■□□□□ 0.9
CCDC113-204ENST00000566498 INTS6LQ5JSJ4 861 aaKnown RBP20.69■□□□□ 0.9
CCDC113-204ENST00000566498 ZNF658Q5TYW1 1059 aaPredicted RBP20.69■□□□□ 0.9
CCDC113-204ENST00000566498 TDRD10Q5VZ19 366 aaKnown RBP20.69■□□□□ 0.9
CCDC113-204ENST00000566498 SPATA2LQ8IUW3 424 aaPredicted RBP20.69■□□□□ 0.9
CCDC113-204ENST00000566498 SIX5Q8N196 739 aa20.69■□□□□ 0.9
CCDC113-204ENST00000566498 OR6B3Q8NGW1 331 aa20.69■□□□□ 0.9
CCDC113-204ENST00000566498 GPR152Q8TDT2 470 aa20.69■□□□□ 0.9
CCDC113-204ENST00000566498 ZSWIM3Q96MP5 696 aa20.69■□□□□ 0.9
CCDC113-204ENST00000566498 LPIN3Q9BQK8 851 aa20.69■□□□□ 0.9
CCDC113-204ENST00000566498 WNT16Q9UBV4 365 aa20.69■□□□□ 0.9
CCDC113-204ENST00000566498 A0A1W2PRU2 124 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 MYBPHLA2RUH7 354 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 IKBKBO14920 756 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 ATP2C2O75185 946 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 KRT13P13646 458 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 CYP2F1P24903 491 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 PSMC2P35998 433 aaKnown RBP20.68■□□□□ 0.9
CCDC113-204ENST00000566498 VAMP7P51809 220 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 GPC5P78333 572 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 NCOA4Q13772 614 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 NFIL3Q16649 462 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 FAM78AQ5JUQ0 283 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 ISM2Q6H9L7 571 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 TANGO2Q6ICL3 276 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 FAM186BQ8IYM0 893 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 FLCNQ8NFG4 579 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 KBTBD7Q8WVZ9 684 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 LRRC3Q9BY71 257 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 GPR88Q9GZN0 384 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 ATXN3LQ9H3M9 355 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 ZFP14Q9HCL3 533 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms