RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 RIPOR1Q6ZS17 1223 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ZNF804AQ7Z570 1209 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CHERPQ8IWX8 916 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 CDAN1Q8IWY9 1227 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 FAM186BQ8IYM0 893 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 GDPD5Q8WTR4 605 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 EME1Q96AY2 570 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PKIBQ9C010 78 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 MAN1C1Q9NR34 630 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 AMACRQ9UHK6 382 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PRAMEF22A3QJZ6 481 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 FAM47DPA6NHR8 397 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CBY3A6NI87 242 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 NEURL1BA8MQ27 555 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 B4E1Z4 1266 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 RGS13O14921 159 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 DENRO43583 198 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 KLHL41O60662 606 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 IDH1O75874 414 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 KRT38O76015 456 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 MAPK1P28482 360 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 KRT2P35908 639 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 TNNI2P48788 182 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CDK18Q07002 472 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 STRN3Q13033 797 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 C11orf63Q6NUN7 778 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 ALKBH5Q6P6C2 394 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 KYAT3Q6YP21 454 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 PTCD2Q8WV60 388 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 ALG3Q92685 438 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 DPF1Q92782 380 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 STMN2Q93045 179 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 HSPBAP1Q96EW2 488 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CENPOQ9BU64 300 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 OSBPL6Q9BZF3 934 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 PSTPIP2Q9H939 334 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 NDE1Q9NXR1 346 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 AXIN2Q9Y2T1 843 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 RTCBQ9Y3I0 505 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 TRIM64BA6NI03 449 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 RASA4BC9J798 803 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 MAGEB3O15480 346 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 RASA4O43374 803 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 ADAM23O75077 832 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 USP1O94782 785 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 INHBBP09529 407 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 VEPH1Q14D04 833 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 SIX1Q15475 284 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 ARHGEF18Q6ZSZ5 1173 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 PEX26Q7Z412 305 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CCDC105Q8IYK2 499 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 KLC2Q9H0B6 622 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 RETREG1Q9H6L5 497 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 NOX1Q9Y5S8 564 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 SLC12A7Q9Y666 1083 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CLTCQ00610 1675 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 FAM25EA8MYX2 175 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 FKBP6O75344 327 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 SRGAP2BP0DMP2 458 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 PTK6Q13882 451 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 EPHA7Q15375 998 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 OCLNQ16625 522 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 HERC4Q5GLZ8 1057 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 RABGAP1LQ5R372 815 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 DENND2CQ68D51 928 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 VASH1Q7L8A9 365 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 ERI1Q8IV48 349 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 ANKRD35Q8N283 1001 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CASP10Q92851 521 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 SENP7Q9BQF6 1050 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 NAALADL1Q9UQQ1 740 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 ANKRD34BA5PLL1 514 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 H0Y8G0 127 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 SPTLC1O15269 473 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 TP73O15350 636 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CNOT3O75175 753 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 FCER1AP12319 257 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 GABRB3P28472 473 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 IFRD2Q12894 506 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 THOC5Q13769 683 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 CCNIQ14094 377 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 TGFBIQ15582 683 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 RTN1Q16799 776 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 LRRC24Q50LG9 513 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 FAM209AQ5JX71 171 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 DTHD1Q6ZMT9 781 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 DHDDSQ86SQ9 333 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 GUF1Q8N442 669 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 XXYLT1Q8NBI6 393 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CLIP3Q96DZ5 547 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 RNF26Q9BY78 433 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 MRPS26Q9BYN8 205 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 MTO1Q9Y2Z2 717 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 P4HA2O15460 535 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 KLHL30Q0D2K2 578 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 SLC29A2Q14542 456 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 C16orf72Q14CZ0 275 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 DLGAP5Q15398 846 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 C1orf228Q6PIY5 440 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 ATG14Q6ZNE5 492 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms