RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SZT2Q5T011 3432 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 HIDE1A8MVS5 230 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 H7C4K7 107 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 WEE2P0C1S8 567 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 ACO1P21399 889 aaKnown RBP13.48□□□□□ -0.25
SF3B3-206ENST00000565990 TBXAS1P24557 533 aaPredicted RBP13.48□□□□□ -0.25
SF3B3-206ENST00000565990 LMO2P25791 158 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 IRS1P35568 1242 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 CUL2Q13617 745 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 KIAA1841Q6NSI8 718 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 RSPO2Q6UXX9 243 aaPredicted RBP13.48□□□□□ -0.25
SF3B3-206ENST00000565990 ENOSF1Q7L5Y1 443 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 UNC93AQ86WB7 457 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 ARHGEF19Q8IW93 802 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 CRYBG2Q8N1P7 616 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 THEM5Q8N1Q8 247 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 C17orf53Q8N3J3 647 aaPredicted RBP13.48□□□□□ -0.25
SF3B3-206ENST00000565990 WHAMMQ8TF30 809 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 GDPD5Q8WTR4 605 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 KREMEN1Q96MU8 473 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 MRPL45Q9BRJ2 306 aaKnown RBP13.48□□□□□ -0.25
SF3B3-206ENST00000565990 XPO4Q9C0E2 1151 aaKnown RBP13.48□□□□□ -0.25
SF3B3-206ENST00000565990 PRDM12Q9H4Q4 367 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 MYO7AQ13402 2215 aa13.48□□□□□ -0.25
SF3B3-206ENST00000565990 CDH23Q9H251 3354 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 OR6C75A6NL08 312 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 PES1O00541 588 aaKnown RBP13.47□□□□□ -0.25
SF3B3-206ENST00000565990 TEX28O15482 410 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 ABLIM3O94929 683 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 URODP06132 367 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 CNPP09543 421 aaKnown RBP13.47□□□□□ -0.25
SF3B3-206ENST00000565990 MFAP3P55082 362 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 FAM193AP78312 1265 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 APBA1Q02410 837 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 CREMQ03060 361 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 ADGRE1Q14246 886 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 PSMD5Q16401 504 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 FAM171BQ6P995 826 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 LILRA6Q6PI73 481 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 PRSS55Q6UWB4 352 aaPredicted RBP13.47□□□□□ -0.25
SF3B3-206ENST00000565990 RRAGAQ7L523 313 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 OSTM1Q86WC4 334 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 ADGRF2Q8IZF7 708 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 KLHL5Q96PQ7 755 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 PKMYT1Q99640 499 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 ARID3AQ99856 593 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 EDEM3Q9BZQ6 932 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 ZCWPW1Q9H0M4 648 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 GANQ9H2C0 597 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 SMYD3Q9H7B4 428 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 UBE2TQ9NPD8 197 aaPredicted RBP13.47□□□□□ -0.25
SF3B3-206ENST00000565990 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.47□□□□□ -0.255e-17■■■■■ 409.9
SF3B3-206ENST00000565990 CISHQ9NSE2 258 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 DDX43Q9NXZ2 648 aaKnown RBP13.47□□□□□ -0.25
SF3B3-206ENST00000565990 BARX2Q9UMQ3 279 aaPredicted RBP13.47□□□□□ -0.25
SF3B3-206ENST00000565990 MTCH2Q9Y6C9 303 aa13.47□□□□□ -0.25
SF3B3-206ENST00000565990 CILPO75339 1184 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 UCHL3P15374 230 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 RFX1P22670 979 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 KLK7P49862 253 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 GPR17Q13304 367 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 KCNC3Q14003 757 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 RAB33AQ14088 237 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 CTXN3Q4LDR2 81 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 FIGNQ5HY92 759 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 GJB7Q6PEY0 223 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 LRRTM3Q86VH5 581 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 PPM1KQ8N3J5 372 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 OR6B3Q8NGW1 331 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 OR10T2Q8NGX3 314 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 ZNF461Q8TAF7 563 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 MICAL1Q8TDZ2 1067 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 AUTS2Q8WXX7 1259 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 KAT5Q92993 513 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 C16orf45Q96MC5 204 aaPredicted RBP13.46□□□□□ -0.25
SF3B3-206ENST00000565990 STK33Q9BYT3 514 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 GPR88Q9GZN0 384 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 SNX25Q9H3E2 840 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 ENTPD7Q9NQZ7 604 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 DNAJC12Q9UKB3 198 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 CDH9Q9ULB4 789 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 MAFFQ9ULX9 164 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 REV3LO60673 3130 aa13.46□□□□□ -0.25
SF3B3-206ENST00000565990 PLXNA3P51805 1871 aa13.46□□□□□ -0.26
SF3B3-206ENST00000565990 RNF225M0QZC1 329 aaPredicted RBP13.45□□□□□ -0.26
SF3B3-206ENST00000565990 C2CD2LO14523 706 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 EPHB6O15197 1021 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 ADAM12O43184 909 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 CLASP2O75122 1294 aaKnown RBP13.45□□□□□ -0.26
SF3B3-206ENST00000565990 RPL17P18621 184 aaKnown RBP13.45□□□□□ -0.26
SF3B3-206ENST00000565990 PCSK1P29120 753 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 OR1D2P34982 312 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 RAP1GAPP47736 663 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 NDUFV1P49821 464 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 NDST1P52848 882 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 RAD23BP54727 409 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 YWHAEP62258 255 aaKnown RBP13.45□□□□□ -0.26
SF3B3-206ENST00000565990 IQCEQ6IPM2 695 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 ZNF280DQ6N043 979 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 SLC22A17Q8WUG5 538 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms