RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 KALRNO60229 2985 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 J3QKU1 62 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 PODXLO00592 558 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 PRPF3O43395 683 aaKnown RBP12.17□□□□□ -0.46
CAPN3-215ENST00000565559 MARCH6O60337 910 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 C1QL1O75973 258 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 PRAMEF12O95522 483 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 HOXD12P35452 270 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 ADD1P35611 737 aaKnown RBP12.17□□□□□ -0.46
CAPN3-215ENST00000565559 GALK1P51570 392 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 NLRP5P59047 1200 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 GUCA2AQ02747 115 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 MRPL58Q14197 206 aaKnown RBP12.17□□□□□ -0.46
CAPN3-215ENST00000565559 EPHA7Q15375 998 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 DCAF4L1Q3SXM0 396 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 LYSMD4Q5XG99 296 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 ANO7Q6IWH7 933 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 RNF19BQ6ZMZ0 732 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 ARMCX6Q7L4S7 300 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 APBB1IPQ7Z5R6 666 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-215ENST00000565559 CEP76Q8TAP6 659 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 CNOT6LQ96LI5 555 aaKnown RBP12.17□□□□□ -0.46
CAPN3-215ENST00000565559 FAM20AQ96MK3 541 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 GCNAQ96QF7 691 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 LRRC3Q9BY71 257 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 BACH2Q9BYV9 841 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 POLR3FQ9H1D9 316 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-215ENST00000565559 EBF3Q9H4W6 596 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 GOLGA2P5Q9HBQ8 144 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 DKK4Q9UBT3 224 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 MBD1Q9UIS9 605 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-215ENST00000565559 VAV3Q9UKW4 847 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 APOBEC2Q9Y235 224 aaKnown RBP12.17□□□□□ -0.46
CAPN3-215ENST00000565559 ASB3Q9Y575 518 aa12.17□□□□□ -0.46
CAPN3-215ENST00000565559 EML5Q05BV3 1969 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 HECTD1Q9ULT8 2610 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 ATXN7O15265 892 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-215ENST00000565559 ALDH1A2O94788 518 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 FTH1P19P0C7X4 201 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 GABRR2P28476 465 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 PDIA3P30101 505 aaKnown RBP12.16□□□□□ -0.46
CAPN3-215ENST00000565559 CTTNQ14247 550 aaKnown RBP12.16□□□□□ -0.46
CAPN3-215ENST00000565559 ANKRD1Q15327 319 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 FAM187BQ17R55 369 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 CC2D1AQ6P1N0 951 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-215ENST00000565559 RABEPKQ7Z6M1 372 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 ITIH5Q86UX2 942 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 RASSF3Q86WH2 238 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 TPH2Q8IWU9 490 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 LSM14AQ8ND56 463 aaKnown RBP12.16□□□□□ -0.46
CAPN3-215ENST00000565559 FAM83CQ9BQN1 747 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 C2orf40Q9H1Z8 148 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 FZD8Q9H461 694 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 TASP1Q9H6P5 420 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 TOPORSQ9NS56 1045 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-215ENST00000565559 RGL1Q9NZL6 768 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 VPS54Q9P1Q0 977 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 SLC6A14Q9UN76 642 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 NUP205Q92621 2012 aa12.16□□□□□ -0.46
CAPN3-215ENST00000565559 MYO18BQ8IUG5 2567 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 A0A087WV48 116 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 CAPN8A6NHC0 703 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 CAPN9O14815 690 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 NDUFV2P19404 249 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 MARCKSP29966 332 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-215ENST00000565559 MCM4P33991 863 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 ABCG1P45844 678 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 NEK4P51957 841 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 YARSP54577 528 aaKnown RBP12.15□□□□□ -0.46
CAPN3-215ENST00000565559 DUOXA1Q1HG43 343 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 SPDYCQ5MJ68 293 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 NCAPH2Q6IBW4 605 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 GAREM2Q75VX8 874 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 TTC30AQ86WT1 665 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 LURAP1LQ8IV03 231 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 TMEFF1Q8IYR6 380 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 MINDY1Q8N5J2 469 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 DYDC2Q96IM9 177 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 KIF2CQ99661 725 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 OXCT2Q9BYC2 517 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-215ENST00000565559 DNAJC25Q9H1X3 360 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 KDM4CQ9H3R0 1056 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 FBRSL1Q9HCM7 1045 aaKnown RBP12.15□□□□□ -0.46
CAPN3-215ENST00000565559 HPS4Q9NQG7 708 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 TMEM74BQ9NUR3 256 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 ZMYM5Q9UJ78 669 aa12.15□□□□□ -0.46
CAPN3-215ENST00000565559 ATXN2Q99700 1313 aaKnown RBP12.14□□□□□ -0.47
CAPN3-215ENST00000565559 CELSR3Q9NYQ7 3312 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 SMIM28A0A1B0GU29 152 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 ZBTB39O15060 712 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 LIG1P18858 919 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 CDC25CP30307 473 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 AVPR1AP37288 418 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 PTGER3P43115 390 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 BFSP1Q12934 665 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 SLC14A1Q13336 389 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 BYSLQ13895 437 aaKnown RBP12.14□□□□□ -0.47
CAPN3-215ENST00000565559 PDGFRLQ15198 375 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 CDCA2Q69YH5 1023 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms