RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 LAMP2P13473 410 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 WARSP23381 471 aaKnown RBP16.54■□□□□ 0.24
COMMD4-212ENST00000565517 CCNE1P24864 410 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 EPHB3P54753 998 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 NTHL1P78549 312 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 ZXDAP98168 799 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 BIRC3Q13489 604 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 NCOA4Q13772 614 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 MORC3Q14149 939 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 WDR72Q3MJ13 1102 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 C1orf220Q5T0J3 134 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 ANKRD40Q6AI12 368 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 IQCEQ6IPM2 695 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 FOXR2Q6PJQ5 311 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 SV2AQ7L0J3 742 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 GET4Q7L5D6 327 aaPredicted RBP16.54■□□□□ 0.24
COMMD4-212ENST00000565517 TRIML1Q8N9V2 468 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 CEP72Q9P209 647 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 CDH7Q9ULB5 785 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 SLC27A5Q9Y2P5 690 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 YIPF1Q9Y548 306 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 ZNF197O14709 1029 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 VNN1O95497 513 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 EPB41P11171 864 aaKnown RBP16.53■□□□□ 0.24
COMMD4-212ENST00000565517 GTF2H1P32780 548 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 EPHA5P54756 1037 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 TNNC1P63316 161 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 SGSM1Q2NKQ1 1148 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 INTS6LQ5JSJ4 861 aaKnown RBP16.53■□□□□ 0.24
COMMD4-212ENST00000565517 ISM2Q6H9L7 571 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 OSTM1Q86WC4 334 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 UBALD2Q8IYN6 164 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 ITFG1Q8TB96 612 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 KBTBD7Q8WVZ9 684 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 TAF4BQ92750 862 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 FGF13Q92913 245 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 MMS19Q96T76 1030 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 PKMYT1Q99640 499 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 CORO1BQ9BR76 489 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 ABCB6Q9NP58 842 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 KIAA1468Q9P260 1216 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 CDH9Q9ULB4 789 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 MRPS23Q9Y3D9 190 aaKnown RBP16.53■□□□□ 0.24
COMMD4-212ENST00000565517 PCDHB5Q9Y5E4 795 aa16.53■□□□□ 0.24
COMMD4-212ENST00000565517 SLC16A3O15427 465 aaKnown RBP16.52■□□□□ 0.24
COMMD4-212ENST00000565517 HAPLN1P10915 354 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-212ENST00000565517 BMP6P22004 513 aa16.52■□□□□ 0.24
COMMD4-212ENST00000565517 PMS1P54277 932 aaKnown RBP16.52■□□□□ 0.24
COMMD4-212ENST00000565517 MTMR3Q13615 1198 aa16.52■□□□□ 0.24
COMMD4-212ENST00000565517 ZNF699Q32M78 642 aa16.52■□□□□ 0.24
COMMD4-212ENST00000565517 ZNF667Q5HYK9 610 aa16.52■□□□□ 0.24
COMMD4-212ENST00000565517 PRSS36Q5K4E3 855 aa16.52■□□□□ 0.24
COMMD4-212ENST00000565517 CYP4A22Q5TCH4 519 aa16.52■□□□□ 0.24
COMMD4-212ENST00000565517 FAM171BQ6P995 826 aa16.52■□□□□ 0.24
COMMD4-212ENST00000565517 KCNK12Q9HB15 430 aa16.52■□□□□ 0.24
COMMD4-212ENST00000565517 TMLHEQ9NVH6 421 aa16.52■□□□□ 0.24
COMMD4-212ENST00000565517 GDE1Q9NZC3 331 aa16.52■□□□□ 0.24
COMMD4-212ENST00000565517 TRIOO75962 3097 aa16.52■□□□□ 0.23
COMMD4-212ENST00000565517 PTPRDP23468 1912 aa16.52■□□□□ 0.23
COMMD4-212ENST00000565517 TECTAO75443 2155 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 DENND4CQ5VZ89 1909 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 PPP1R3GB7ZBB8 358 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 ANHXE9PGG2 379 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 STX10O60499 249 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 ASGR2P07307 311 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
COMMD4-212ENST00000565517 ACAT1P24752 427 aaKnown RBP16.51■□□□□ 0.23
COMMD4-212ENST00000565517 LMO2P25791 158 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 GNL1P36915 607 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-212ENST00000565517 SIGLEC14Q08ET2 396 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 TDGQ13569 410 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 MAPRE1Q15691 268 aaKnown RBP16.51■□□□□ 0.23
COMMD4-212ENST00000565517 SLC5A9Q2M3M2 681 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 MGAT5BQ3V5L5 792 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 TMEM31Q5JXX7 168 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 PDZD4Q76G19 769 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-212ENST00000565517 ITIH5Q86UX2 942 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 TTC9BQ8N6N2 239 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 PSMG2Q969U7 264 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 FUBP3Q96I24 572 aaKnown RBP eCLIP16.51■□□□□ 0.23
COMMD4-212ENST00000565517 GBP4Q96PP9 640 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 LRRC3Q9BY71 257 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 DNAJC25Q9H1X3 360 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 SNX25Q9H3E2 840 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 TMEM8AQ9HCN3 771 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 C11orf16Q9NQ32 467 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 ASAH2Q9NR71 780 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 ABI2Q9NYB9 513 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-212ENST00000565517 NXF1Q9UBU9 619 aaKnown RBP16.51■□□□□ 0.23
COMMD4-212ENST00000565517 GTF3C4Q9UKN8 822 aa16.51■□□□□ 0.23
COMMD4-212ENST00000565517 BICDL2A1A5D9 508 aa16.5■□□□□ 0.23
COMMD4-212ENST00000565517 TRIM49BA6NDI0 452 aa16.5■□□□□ 0.23
COMMD4-212ENST00000565517 BIN1O00499 593 aa16.5■□□□□ 0.23
COMMD4-212ENST00000565517 ASS1P00966 412 aaKnown RBP16.5■□□□□ 0.23
COMMD4-212ENST00000565517 HLA-DRAP01903 254 aa16.5■□□□□ 0.23
COMMD4-212ENST00000565517 TRIM49P0CI25 452 aa16.5■□□□□ 0.23
COMMD4-212ENST00000565517 TRIM49CP0CI26 452 aa16.5■□□□□ 0.23
COMMD4-212ENST00000565517 P4HA1P13674 534 aa16.5■□□□□ 0.23
COMMD4-212ENST00000565517 GCLMP48507 274 aa16.5■□□□□ 0.23
COMMD4-212ENST00000565517 PPP3CAQ08209 521 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms