RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	GBF1	Q92538	1859 aa		10.49	□□□□□ -0.73
SIN3A-205	ENST00000564778	CHD9	Q3L8U1	2897 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	LCHN	A4D1U4	455 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	LINC01553	A4QN01	128 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	SOWAHD	A6NJG2	315 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778		A8MXQ7	604 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	NT5C1B-RDH14	C9J2C7	533 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	LCA5L	O95447	670 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	SOD2	P04179	222 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	PLEK	P08567	350 aa	Predicted RBP	10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	SKIL	P12757	684 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	PCSK1	P29120	753 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	TKT	P29401	623 aa	Known RBP	10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	GNL1	P36915	607 aa	Predicted RBP	10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	SMAD3	P84022	425 aa	Known RBP	10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	FMO1	Q01740	532 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	CDR2	Q01850	454 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	PLCB3	Q01970	1234 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	ARID5A	Q03989	594 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	MRPL58	Q14197	206 aa	Known RBP	10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	BMS1	Q14692	1282 aa	Known RBP	10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	STIL	Q15468	1287 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	TDRD12	Q587J7	1177 aa	Known RBP	10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	SPOUT1	Q5T280	376 aa	Known RBP	10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	ARHGAP17	Q68EM7	881 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	OVOS1	Q6IE37	1185 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	VPS36	Q86VN1	386 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	METTL23	Q86XA0	190 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	GPR65	Q8IYL9	337 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	OR6B3	Q8NGW1	331 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	SLC20A1	Q8WUM9	679 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	TMEM169	Q96HH4	297 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	TNIP3	Q96KP6	325 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	PKMYT1	Q99640	499 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	AGPAT1	Q99943	283 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	ZSWIM1	Q9BR11	485 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	ACBD6	Q9BR61	282 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	PLVAP	Q9BX97	442 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	DNAI2	Q9GZS0	605 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	ACP6	Q9NPH0	428 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	DDX43	Q9NXZ2	648 aa	Known RBP	10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	CDH9	Q9ULB4	789 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	PCDHGC3	Q9UN70	934 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	PCDHB12	Q9Y5F1	795 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	PCDHA11	Q9Y5I1	949 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	ATP8B3	O60423	1300 aa		10.48	□□□□□ -0.73
SIN3A-205	ENST00000564778	C5orf67	F2Z3F1	127 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778		O00370	1275 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	HCRT	O43612	131 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	TBC1D4	O60343	1298 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	VDR	P11473	427 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	CHRNB2	P17787	502 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	LMO2	P25791	158 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	CYLC1	P35663	651 aa	Predicted RBP	10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	EIF4A3	P38919	411 aa	Known RBP	10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	KIF11	P52732	1056 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	YWHAH	Q04917	246 aa	Predicted RBP	10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	SLC18A3	Q16572	532 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	USP41	Q3LFD5	358 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	ZNF394	Q53GI3	561 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	INTS6L	Q5JSJ4	861 aa	Known RBP	10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	RTP2	Q5QGT7	225 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	VARS2	Q5ST30	1063 aa	Known RBP	10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	ZNF697	Q5TEC3	545 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	FAM171A1	Q5VUB5	890 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	ZNF280D	Q6N043	979 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	RAD9B	Q6WBX8	426 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	TRIM72	Q6ZMU5	477 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	DDX53	Q86TM3	631 aa	Known RBP	10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	GPIHBP1	Q8IV16	184 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	DEFB123	Q8N688	67 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	B3GALNT2	Q8NCR0	500 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	OR10T2	Q8NGX3	314 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	SLC30A5	Q8TAD4	765 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	LNX1	Q8TBB1	728 aa	Predicted RBP	10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	PIK3R5	Q8WYR1	880 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	TFAP2B	Q92481	460 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	CCDC42	Q96M95	316 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	SYT15	Q9BQS2	421 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	TTPAL	Q9BTX7	342 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	DPEP3	Q9H4B8	488 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	CHST7	Q9NS84	486 aa		10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	TIMM13	Q9Y5L4	95 aa	Predicted RBP	10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
SIN3A-205	ENST00000564778	PTPRD	P23468	1912 aa		10.46	□□□□□ -0.73
SIN3A-205	ENST00000564778	TMEM265	A0A087WTH1	108 aa		10.46	□□□□□ -0.73
SIN3A-205	ENST00000564778	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.46	□□□□□ -0.73
SIN3A-205	ENST00000564778	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.46	□□□□□ -0.73
SIN3A-205	ENST00000564778	OR6C75	A6NL08	312 aa		10.46	□□□□□ -0.73
SIN3A-205	ENST00000564778	EIF3CL	B5ME19	914 aa	Known RBP	10.46	□□□□□ -0.73
SIN3A-205	ENST00000564778	DDX3X	O00571	662 aa	Known RBP eCLIP	10.46	□□□□□ -0.73	9e-7	■□□□□ 10.3
SIN3A-205	ENST00000564778	THAP12	O43422	761 aa		10.46	□□□□□ -0.73
SIN3A-205	ENST00000564778	MED7	O43513	233 aa		10.46	□□□□□ -0.73
SIN3A-205	ENST00000564778	FGF18	O76093	207 aa		10.46	□□□□□ -0.73
SIN3A-205	ENST00000564778	NDUFA10	O95299	355 aa		10.46	□□□□□ -0.73
SIN3A-205	ENST00000564778	LSM8	O95777	96 aa	Known RBP	10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms