RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 VEPH1Q14D04 833 aa25.75■■□□□ 1.71
NME3-206ENST00000564252 ARHGAP15Q53QZ3 475 aa25.75■■□□□ 1.71
NME3-206ENST00000564252 SPPL2BQ8TCT7 592 aa25.75■■□□□ 1.71
NME3-206ENST00000564252 MSANTD3Q96H12 275 aa25.75■■□□□ 1.71
NME3-206ENST00000564252 PANK2Q9BZ23 570 aa25.75■■□□□ 1.71
NME3-206ENST00000564252 CEP250Q9BV73 2442 aa25.75■■□□□ 1.71
NME3-206ENST00000564252 HAPLN1P10915 354 aaPredicted RBP25.74■■□□□ 1.71
NME3-206ENST00000564252 IDEP14735 1019 aa25.74■■□□□ 1.71
NME3-206ENST00000564252 GARTP22102 1010 aa25.74■■□□□ 1.71
NME3-206ENST00000564252 CYP4F8P98187 520 aa25.74■■□□□ 1.71
NME3-206ENST00000564252 TFAMQ00059 246 aaKnown RBP25.74■■□□□ 1.71
NME3-206ENST00000564252 ALCAMQ13740 583 aa25.74■■□□□ 1.71
NME3-206ENST00000564252 C1orf127Q8N9H9 656 aa25.74■■□□□ 1.71
NME3-206ENST00000564252 RMDN1Q96DB5 314 aa25.74■■□□□ 1.71
NME3-206ENST00000564252 FAM126AQ9BYI3 521 aaPredicted RBP25.74■■□□□ 1.71
NME3-206ENST00000564252 EPC1Q9H2F5 836 aa25.74■■□□□ 1.71
NME3-206ENST00000564252 TASP1Q9H6P5 420 aa25.74■■□□□ 1.71
NME3-206ENST00000564252 C8orf33Q9H7E9 229 aaPredicted RBP25.74■■□□□ 1.71
NME3-206ENST00000564252 OBP2AQ9NY56 170 aa25.74■■□□□ 1.71
NME3-206ENST00000564252 ABI2Q9NYB9 513 aaPredicted RBP25.74■■□□□ 1.71
NME3-206ENST00000564252 SLC38A8A6NNN8 435 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 DPYSL4O14531 572 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 PRAMEF12O95522 483 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 LDHAP00338 332 aaKnown RBP25.73■■□□□ 1.71
NME3-206ENST00000564252 ITGB3P05106 788 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 CDC25CP30307 473 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 POLR2BP30876 1174 aaKnown RBP25.73■■□□□ 1.71
NME3-206ENST00000564252 PNPLA4P41247 253 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 SOX9P48436 509 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 ARHGAP29Q52LW3 1261 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 C1orf228Q6PIY5 440 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 DCP1BQ8IZD4 617 aaKnown RBP25.73■■□□□ 1.71
NME3-206ENST00000564252 CXorf38Q8TB03 319 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 GIPC2Q8TF65 315 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 ZFYVE19Q96K21 471 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 CBWD1Q9BRT8 395 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 PANK4Q9NVE7 773 aa25.73■■□□□ 1.71
NME3-206ENST00000564252 RBAKQ9NYW8 714 aaPredicted RBP25.73■■□□□ 1.71
NME3-206ENST00000564252 NASPP49321 788 aaPredicted RBP25.72■■□□□ 1.71
NME3-206ENST00000564252 KPNA1P52294 538 aaPredicted RBP25.72■■□□□ 1.71
NME3-206ENST00000564252 GAS6Q14393 721 aa25.72■■□□□ 1.71
NME3-206ENST00000564252 WDR44Q5JSH3 913 aa25.72■■□□□ 1.71
NME3-206ENST00000564252 SCARA3Q6AZY7 606 aa25.72■■□□□ 1.71
NME3-206ENST00000564252 SYCP3Q8IZU3 236 aa25.72■■□□□ 1.71
NME3-206ENST00000564252 FAM84AQ96KN4 292 aa25.72■■□□□ 1.71
NME3-206ENST00000564252 ZSCAN16Q9H4T2 348 aaPredicted RBP25.72■■□□□ 1.71
NME3-206ENST00000564252 TMLHEQ9NVH6 421 aa25.72■■□□□ 1.71
NME3-206ENST00000564252 L1RE1Q9UN81 338 aa25.72■■□□□ 1.71
NME3-206ENST00000564252 AGAP1Q9UPQ3 857 aa25.72■■□□□ 1.71
NME3-206ENST00000564252 SMG5Q9UPR3 1016 aaKnown RBP25.72■■□□□ 1.71
NME3-206ENST00000564252 KIF26AQ9ULI4 1882 aaPredicted RBP25.71■■□□□ 1.71
NME3-206ENST00000564252 MYBPHLA2RUH7 354 aa25.71■■□□□ 1.71
NME3-206ENST00000564252 GOLGA8IPA6NC78 632 aa25.71■■□□□ 1.71
NME3-206ENST00000564252 GOLGA8JA6NMD2 632 aa25.71■■□□□ 1.71
NME3-206ENST00000564252 CCR3P51677 355 aa25.71■■□□□ 1.71
NME3-206ENST00000564252 PDCL2Q8N4E4 241 aa25.71■■□□□ 1.71
NME3-206ENST00000564252 CACTINQ8WUQ7 758 aaKnown RBP25.71■■□□□ 1.71
NME3-206ENST00000564252 GCNAQ96QF7 691 aa25.71■■□□□ 1.71
NME3-206ENST00000564252 SLC46A2Q9BY10 475 aa25.71■■□□□ 1.71
NME3-206ENST00000564252 FOXD4L1Q9NU39 408 aa25.71■■□□□ 1.71
NME3-206ENST00000564252 GTSE1Q9NYZ3 720 aa25.71■■□□□ 1.71
NME3-206ENST00000564252 NCDNQ9UBB6 729 aa25.71■■□□□ 1.71
NME3-206ENST00000564252 PCDHB5Q9Y5E4 795 aa25.71■■□□□ 1.71
NME3-206ENST00000564252 DENND4CQ5VZ89 1909 aa25.71■■□□□ 1.71
NME3-206ENST00000564252 SPECC1L-ADORA2AF8WAN1 911 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 STX6O43752 255 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 EXTL3O43909 919 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 HMGA1P17096 107 aaKnown RBP25.7■■□□□ 1.7
NME3-206ENST00000564252 CTHP32929 405 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 TSPY1Q01534 308 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 TAF12Q16514 161 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 TXNDC11Q6PKC3 985 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 TMEM150AQ86TG1 271 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 RALGPS2Q86X27 583 aaPredicted RBP25.7■■□□□ 1.7
NME3-206ENST00000564252 LRRC52Q8N7C0 313 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 PDILTQ8N807 584 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 TTC8Q8TAM2 541 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 BPIFB1Q8TDL5 484 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 PCIF1Q9H4Z3 704 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 ITGA11Q9UKX5 1188 aa25.7■■□□□ 1.7
NME3-206ENST00000564252 TULP1O00294 542 aaPredicted RBP25.69■■□□□ 1.7
NME3-206ENST00000564252 PRPF6O94906 941 aaKnown RBP25.69■■□□□ 1.7
NME3-206ENST00000564252 NRLP54845 237 aa25.69■■□□□ 1.7
NME3-206ENST00000564252 SATB1Q01826 763 aa25.69■■□□□ 1.7
NME3-206ENST00000564252 PPP2R5DQ14738 602 aa25.69■■□□□ 1.7
NME3-206ENST00000564252 LEO1Q8WVC0 666 aaPredicted RBP25.69■■□□□ 1.7
NME3-206ENST00000564252 SMG9Q9H0W8 520 aaKnown RBP25.69■■□□□ 1.7
NME3-206ENST00000564252 TMEM206Q9H813 350 aa25.69■■□□□ 1.7
NME3-206ENST00000564252 PDE11AQ9HCR9 933 aa25.69■■□□□ 1.7
NME3-206ENST00000564252 RBM12Q9NTZ6 932 aaKnown RBP25.69■■□□□ 1.7
NME3-206ENST00000564252 OBSL1O75147 1896 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 F11P03951 625 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 GPR15P49685 360 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 NLRP12P59046 1061 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 PLCB2Q00722 1185 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 TNK2Q07912 1038 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 BFSP1Q12934 665 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 LRRC32Q14392 662 aa25.68■■□□□ 1.7
NME3-206ENST00000564252 NFE2Q16621 373 aaPredicted RBP25.68■■□□□ 1.7
NME3-206ENST00000564252 CCDC65Q8IXS2 484 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms