RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 MBD1Q9UIS9 605 aaPredicted RBP17.33■□□□□ 0.36
RNF40-205ENST00000563909 ASB3Q9Y575 518 aa17.33■□□□□ 0.36
RNF40-205ENST00000563909 OSTNP61366 133 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 CYP4F8P98187 520 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 ATF7IP2Q5U623 682 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 MCTP1Q6DN14 999 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 ANO7Q6IWH7 933 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 ARMCX6Q7L4S7 300 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 SPRYD3Q8NCJ5 442 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 MDM1Q8TC05 714 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 BSNDQ8WZ55 320 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 PSMG2Q969U7 264 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 C18orf25Q96B23 403 aaPredicted RBP17.32■□□□□ 0.36
RNF40-205ENST00000563909 SLC46A2Q9BY10 475 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 SCUBE2Q9NQ36 999 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 TOPORSQ9NS56 1045 aaPredicted RBP17.32■□□□□ 0.36
RNF40-205ENST00000563909 PCDHA12Q9UN75 941 aa17.32■□□□□ 0.36
RNF40-205ENST00000563909 NUP210Q8TEM1 1887 aaPredicted RBP17.32■□□□□ 0.36
RNF40-205ENST00000563909 TRIP11Q15643 1979 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 PRB1P04280 392 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 ARSAP15289 507 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 ATP2B1P20020 1258 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 SYT1P21579 422 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 ATXN3P54252 364 aaPredicted RBP17.31■□□□□ 0.36
RNF40-205ENST00000563909 XKR4Q5GH76 650 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 EARS2Q5JPH6 523 aaKnown RBP17.31■□□□□ 0.36
RNF40-205ENST00000563909 NT5DC1Q5TFE4 455 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 LPCAT2Q7L5N7 544 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 APBB1IPQ7Z5R6 666 aaPredicted RBP17.31■□□□□ 0.36
RNF40-205ENST00000563909 SYT12Q8IV01 421 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 MCPH1Q8NEM0 835 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 DEPTORQ8TB45 409 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 EZH1Q92800 747 aaPredicted RBP17.31■□□□□ 0.36
RNF40-205ENST00000563909 EXOC4Q96A65 974 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 GTPBP2Q9BX10 602 aaKnown RBP17.31■□□□□ 0.36
RNF40-205ENST00000563909 PCDHB8Q9UN66 801 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 APC2O95996 2303 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 ACACAQ13085 2346 aa17.31■□□□□ 0.36
RNF40-205ENST00000563909 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 VPS37CA5D8V6 355 aaPredicted RBP17.3■□□□□ 0.36
RNF40-205ENST00000563909 TNFRSF10BO14763 440 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 MAP3K13O43283 966 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 SOAT2O75908 522 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 CFIP05156 583 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 GJA4P35212 333 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 PTGER3P43115 390 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 YWHAHQ04917 246 aaPredicted RBP17.3■□□□□ 0.36
RNF40-205ENST00000563909 GPR17Q13304 367 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 CENPPQ6IPU0 288 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 CCNI2Q6ZMN8 369 aaPredicted RBP17.3■□□□□ 0.36
RNF40-205ENST00000563909 ITIH5Q86UX2 942 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 TMEFF1Q8IYR6 380 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 CEP120Q8N960 986 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 CCDC94Q9BW85 323 aaPredicted RBP17.3■□□□□ 0.36
RNF40-205ENST00000563909 FSCN3Q9NQT6 498 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 CIZ1Q9ULV3 898 aaPredicted RBP17.3■□□□□ 0.36
RNF40-205ENST00000563909 TBX20Q9UMR3 447 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 CCL26Q9Y258 94 aa17.3■□□□□ 0.36
RNF40-205ENST00000563909 TIMM13Q9Y5L4 95 aaPredicted RBP17.3■□□□□ 0.36
RNF40-205ENST00000563909 ASXL3Q9C0F0 2248 aa17.29■□□□□ 0.36
RNF40-205ENST00000563909 STX6O43752 255 aa17.29■□□□□ 0.36
RNF40-205ENST00000563909 OAZ2O95190 189 aa17.29■□□□□ 0.36
RNF40-205ENST00000563909 XRCC6P12956 609 aaKnown RBP eCLIP17.29■□□□□ 0.36
RNF40-205ENST00000563909 GRM5P41594 1212 aa17.29■□□□□ 0.36
RNF40-205ENST00000563909 CC2D1AQ6P1N0 951 aaPredicted RBP17.29■□□□□ 0.36
RNF40-205ENST00000563909 SLC23A3Q6PIS1 610 aa17.29■□□□□ 0.36
RNF40-205ENST00000563909 RASSF3Q86WH2 238 aa17.29■□□□□ 0.36
RNF40-205ENST00000563909 TTC30AQ86WT1 665 aa17.29■□□□□ 0.36
RNF40-205ENST00000563909 CMTM8Q8IZV2 173 aa17.29■□□□□ 0.36
RNF40-205ENST00000563909 ATAD1Q8NBU5 361 aa17.29■□□□□ 0.36
RNF40-205ENST00000563909 CNOT6LQ96LI5 555 aaKnown RBP17.29■□□□□ 0.36
RNF40-205ENST00000563909 GCNAQ96QF7 691 aa17.29■□□□□ 0.36
RNF40-205ENST00000563909 DAXXQ9UER7 740 aaPredicted RBP17.29■□□□□ 0.36
RNF40-205ENST00000563909 NOL7Q9UMY1 257 aaKnown RBP17.29■□□□□ 0.36
RNF40-205ENST00000563909 FAM205CA6NFA0 338 aa17.28■□□□□ 0.36
RNF40-205ENST00000563909 OPHN1O60890 802 aa17.28■□□□□ 0.36
RNF40-205ENST00000563909 KCNE1P15382 129 aa17.28■□□□□ 0.36
RNF40-205ENST00000563909 NAMPTP43490 491 aa17.28■□□□□ 0.36
RNF40-205ENST00000563909 HNRNPDQ14103 355 aaKnown RBP17.28■□□□□ 0.36
RNF40-205ENST00000563909 TRIP6Q15654 476 aaKnown RBP17.28■□□□□ 0.36
RNF40-205ENST00000563909 TTC9BQ8N6N2 239 aa17.28■□□□□ 0.36
RNF40-205ENST00000563909 PNPLA1Q8N8W4 532 aa17.28■□□□□ 0.36
RNF40-205ENST00000563909 MDGA1Q8NFP4 955 aa17.28■□□□□ 0.36
RNF40-205ENST00000563909 ADAMTS14Q8WXS8 1223 aa17.28■□□□□ 0.36
RNF40-205ENST00000563909 FNBP1Q96RU3 617 aa17.28■□□□□ 0.36
RNF40-205ENST00000563909 KIFC3Q9BVG8 833 aa17.28■□□□□ 0.36
RNF40-205ENST00000563909 OXCT2Q9BYC2 517 aaPredicted RBP17.28■□□□□ 0.36
RNF40-205ENST00000563909 TTC12Q9H892 705 aaPredicted RBP17.28■□□□□ 0.36
RNF40-205ENST00000563909 ATXN2Q99700 1313 aaKnown RBP17.27■□□□□ 0.36
RNF40-205ENST00000563909 CDC25CP30307 473 aa17.27■□□□□ 0.36
RNF40-205ENST00000563909 AVPR1AP37288 418 aa17.27■□□□□ 0.36
RNF40-205ENST00000563909 TXKP42681 527 aa17.27■□□□□ 0.36
RNF40-205ENST00000563909 TRAPPC10P48553 1259 aa17.27■□□□□ 0.36
RNF40-205ENST00000563909 EFNA5P52803 228 aa17.27■□□□□ 0.36
RNF40-205ENST00000563909 GFPT1Q06210 699 aaPredicted RBP17.27■□□□□ 0.36
RNF40-205ENST00000563909 BFSP1Q12934 665 aa17.27■□□□□ 0.36
RNF40-205ENST00000563909 PDGFRLQ15198 375 aa17.27■□□□□ 0.36
RNF40-205ENST00000563909 CALCRLQ16602 461 aa17.27■□□□□ 0.36
RNF40-205ENST00000563909 C2orf27AQ580R0 203 aa17.27■□□□□ 0.36
RNF40-205ENST00000563909 USP37Q86T82 979 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms