RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 RINT1Q6NUQ1 792 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 LCA5Q86VQ0 697 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 NME8Q8N427 588 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 TCP10LQ8TDR4 215 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 DHX38Q92620 1227 aaKnown RBP13.39□□□□□ -0.27
CCDC187-201ENST00000563590 TRAPPC9Q96Q05 1148 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 PI4K2AQ9BTU6 479 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 SUDS3Q9H7L9 328 aaPredicted RBP13.39□□□□□ -0.27
CCDC187-201ENST00000563590 DNAAF2Q9NVR5 837 aaKnown RBP13.39□□□□□ -0.27
CCDC187-201ENST00000563590 WHRNQ9P202 907 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 KIF13BQ9NQT8 1826 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 NRAPQ86VF7 1730 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 PEX10O60683 326 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 T-ENOLP0DO92 83 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 BGNP21810 368 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 SSTR1P30872 391 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 MXI1P50539 228 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 HADHBP55084 474 aaKnown RBP13.38□□□□□ -0.27
CCDC187-201ENST00000563590 BFSP1Q12934 665 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 EFTUD2Q15029 972 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCDC187-201ENST00000563590 SH2D4BQ5SQS7 431 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 CD101Q93033 1021 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 C11orf70Q9BRQ4 267 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 ZNF341Q9BYN7 854 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 MANSC1Q9H8J5 431 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 PACSIN3Q9UKS6 424 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 AGTPBP1Q9UPW5 1226 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 LPXNO60711 386 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 POLR2MP0CAP2 368 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 FOXB2Q5VYV0 432 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 OR52E8Q6IFG1 317 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 RHBDF2Q6PJF5 856 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 ARHGAP18Q8N392 663 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 USP6NLQ92738 828 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 DTNBP1Q96EV8 351 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 FAM237BA0A1B0GVD1 139 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 SPECC1L-ADORA2AF8WAN1 911 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 DKC1O60832 514 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCDC187-201ENST00000563590 OR6B1O95007 311 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 STAT2P52630 851 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 NR1H3Q13133 447 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 MAPK6Q16659 721 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 ALYREFQ86V81 257 aaKnown RBP13.38□□□□□ -0.27
CCDC187-201ENST00000563590 ARID3BQ8IVW6 561 aaPredicted RBP13.38□□□□□ -0.27
CCDC187-201ENST00000563590 ASCC2Q9H1I8 757 aaPredicted RBP13.38□□□□□ -0.27
CCDC187-201ENST00000563590 AGPAT3Q9NRZ7 376 aa13.38□□□□□ -0.27
CCDC187-201ENST00000563590 LOC100653049A0A140TA62 436 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 FCHO1O14526 889 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 KRT34O76011 436 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 TNNI1P19237 187 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 ACAP1Q15027 740 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 RASA2Q15283 850 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 LPCAT4Q643R3 524 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 CDR2LQ86X02 465 aaPredicted RBP13.37□□□□□ -0.27
CCDC187-201ENST00000563590 POU5F2Q8N7G0 328 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 C7orf43Q8WVR3 580 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 CLMNQ96JQ2 1002 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 OLFML3Q9NRN5 406 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 SLC17A7Q9P2U7 560 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 CYP3A7-CYP3A51PA0A087WV96 503 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 PDE5AO76074 875 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 EYA4O95677 639 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 ARP10275 920 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 CYP3A7P24462 503 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 PSMC4P43686 418 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 BASP1P80723 227 aaKnown RBP13.37□□□□□ -0.27
CCDC187-201ENST00000563590 CCDC15Q0P6D6 951 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 ACVR2BQ13705 512 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 SGSM1Q2NKQ1 1148 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 TMEM63BQ5T3F8 832 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 IYDQ6PHW0 289 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 PRPF39Q86UA1 669 aaKnown RBP13.37□□□□□ -0.27
CCDC187-201ENST00000563590 LENG9Q96B70 501 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 LRRC19Q9H756 370 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 KAT6AQ92794 2004 aa13.37□□□□□ -0.27
CCDC187-201ENST00000563590 MEIS2O14770 477 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 TTLL12Q14166 644 aaPredicted RBP13.36□□□□□ -0.27
CCDC187-201ENST00000563590 PSMD6Q15008 389 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 LIN52Q52LA3 116 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 SATL1Q86VE3 508 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 RHPN2Q8IUC4 686 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 RTKN2Q8IZC4 609 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 ACAP3Q96P50 834 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 ANLNQ9NQW6 1124 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 PRR12Q9ULL5 1215 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 SMG5Q9UPR3 1016 aaKnown RBP13.36□□□□□ -0.27
CCDC187-201ENST00000563590 MSH4O15457 936 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 GAP43P17677 238 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 IVDP26440 423 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 GALK1P51570 392 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 HIRAP54198 1017 aaPredicted RBP13.36□□□□□ -0.27
CCDC187-201ENST00000563590 PDK4Q16654 411 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 STYK1Q6J9G0 422 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 CENPUQ71F23 418 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 NOP9Q86U38 636 aaKnown RBP13.36□□□□□ -0.27
CCDC187-201ENST00000563590 TRABD2AQ86V40 505 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 SCUBE1Q8IWY4 988 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 LMO3Q8TAP4 145 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 MBOAT7Q96N66 472 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 OLFM3Q96PB7 478 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms