RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 MAPK13O15264 365 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 HCRTO43612 131 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 TRIM49P0CI25 452 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 TRIM49CP0CI26 452 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 MYL4P12829 197 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 PCSK1P29120 753 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 PSMC2P35998 433 aaKnown RBP17.29■□□□□ 0.36
COMMD4-206ENST00000562610 PIK3CAP42336 1068 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 LHX1P48742 406 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 VAMP7P51809 220 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 CLDN10P78369 228 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 SMARCB1Q12824 385 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 NCOA4Q13772 614 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 WDR72Q3MJ13 1102 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 COBLL1Q53SF7 1204 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 INTS6LQ5JSJ4 861 aaKnown RBP17.29■□□□□ 0.36
COMMD4-206ENST00000562610 CYP4A22Q5TCH4 519 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 INTS8Q75QN2 995 aaKnown RBP17.29■□□□□ 0.36
COMMD4-206ENST00000562610 DPH6Q7L8W6 267 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 LRRTM3Q86VH5 581 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 ST13P5Q8NFI4 369 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-206ENST00000562610 SPPL2BQ8TCT7 592 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 C2orf15Q8WU43 125 aaKnown RBP17.29■□□□□ 0.36
COMMD4-206ENST00000562610 KBTBD7Q8WVZ9 684 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 EEF2KMTQ96G04 330 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 ACBD6Q9BR61 282 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 MMRN2Q9H8L6 949 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 KCNK12Q9HB15 430 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 IGSF9Q9P2J2 1179 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 NXF1Q9UBU9 619 aaKnown RBP17.29■□□□□ 0.36
COMMD4-206ENST00000562610 PCDHB5Q9Y5E4 795 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 ZFP37Q9Y6Q3 630 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-206ENST00000562610 TRIM49BA6NDI0 452 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 PSMA7O14818 248 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 GPR37L1O60883 481 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 C4BPAP04003 597 aaKnown RBP17.28■□□□□ 0.36
COMMD4-206ENST00000562610 EPB41P11171 864 aaKnown RBP17.28■□□□□ 0.36
COMMD4-206ENST00000562610 CEBPBP17676 345 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 ATICP31939 592 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 PSMC1P62191 440 aaKnown RBP17.28■□□□□ 0.36
COMMD4-206ENST00000562610 SIGLEC14Q08ET2 396 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 VEPH1Q14D04 833 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 NFE2Q16621 373 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-206ENST00000562610 SCARA5Q6ZMJ2 495 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 TRIM67Q6ZTA4 783 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 NPAS3Q8IXF0 933 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 UBALD2Q8IYN6 164 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 HS6ST3Q8IZP7 471 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 RSAD2Q8WXG1 361 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 SYT15Q9BQS2 421 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 LRFN3Q9BTN0 628 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 SNX25Q9H3E2 840 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 TMLHEQ9NVH6 421 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 HSFX1Q9UBD0 423 aa17.28■□□□□ 0.36
COMMD4-206ENST00000562610 PRR33A8MZF0 331 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 ZNF197O14709 1029 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 GABRDO14764 452 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 CETN3O15182 167 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 VNN1O95497 513 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 STAU1O95793 577 aaKnown RBP17.27■□□□□ 0.36
COMMD4-206ENST00000562610 WARSP23381 471 aaKnown RBP17.27■□□□□ 0.36
COMMD4-206ENST00000562610 TUFMP49411 452 aaKnown RBP17.27■□□□□ 0.36
COMMD4-206ENST00000562610 TDGQ13569 410 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 CCDC142Q17RM4 750 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 ZACNQ401N2 412 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 ZNF667Q5HYK9 610 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 KLHL10Q6JEL2 608 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 ADSSL1Q8N142 457 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 ELMO3Q96BJ8 720 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 TCEAL4Q96EI5 215 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 LPIN3Q9BQK8 851 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 MRPL45Q9BRJ2 306 aaKnown RBP17.27■□□□□ 0.36
COMMD4-206ENST00000562610 PI4K2AQ9BTU6 479 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 XYLT2Q9H1B5 865 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 DNAJC25Q9H1X3 360 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 AVENQ9NQS1 362 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-206ENST00000562610 GTF3C4Q9UKN8 822 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 NUMBLQ9Y6R0 609 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 TRIOO75962 3097 aa17.27■□□□□ 0.36
COMMD4-206ENST00000562610 MYO16Q9Y6X6 1858 aa17.27■□□□□ 0.35
COMMD4-206ENST00000562610 ANAPC1Q9H1A4 1944 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 TMEM221A6NGB7 291 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 M0R296 226 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 IKBKBO14920 756 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 PDGFRBP09619 1106 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 ATF6P18850 670 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 LMO2P25791 158 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 PPP1R2P41236 205 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 CCR2P41597 374 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 GCLMP48507 274 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 PMS1P54277 932 aaKnown RBP17.26■□□□□ 0.35
COMMD4-206ENST00000562610 LRRC63Q05C16 580 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 HTR4Q13639 388 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 TAF12Q16514 161 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 CAMK4Q16566 473 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 PRSS36Q5K4E3 855 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 C1orf220Q5T0J3 134 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 ANKRD40Q6AI12 368 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 MTSS1LQ765P7 747 aa17.26■□□□□ 0.35
COMMD4-206ENST00000562610 SV2AQ7L0J3 742 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms