RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 PBX2P40425 430 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 PDE6CP51160 858 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 BPIFB4P59827 614 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 PLCB3Q01970 1234 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 ARID5AQ03989 594 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 YWHAHQ04917 246 aaPredicted RBP13.49□□□□□ -0.25
CMTM4-203ENST00000561680 PTK2Q05397 1052 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 MRPL58Q14197 206 aaKnown RBP13.49□□□□□ -0.25
CMTM4-203ENST00000561680 RAB30Q15771 203 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 USP41Q3LFD5 358 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 ZNF394Q53GI3 561 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 VARS2Q5ST30 1063 aaKnown RBP13.49□□□□□ -0.25
CMTM4-203ENST00000561680 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 TAS1R1Q7RTX1 841 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 SLC47A2Q86VL8 602 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 LRRC8AQ8IWT6 810 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 TMEM176AQ96HP8 235 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 SAMD11Q96NU1 681 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 TTPALQ9BTX7 342 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 DPEP3Q9H4B8 488 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 ACP6Q9NPH0 428 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 ZNHIT6Q9NWK9 470 aaKnown RBP13.49□□□□□ -0.25
CMTM4-203ENST00000561680 DDX43Q9NXZ2 648 aaKnown RBP13.49□□□□□ -0.25
CMTM4-203ENST00000561680 STK39Q9UEW8 545 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 NOCTQ9UK39 431 aaKnown RBP13.49□□□□□ -0.25
CMTM4-203ENST00000561680 CHD9Q3L8U1 2897 aa13.49□□□□□ -0.25
CMTM4-203ENST00000561680 CALCAP01258 141 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 SKILP12757 684 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 CYP11B1P15538 503 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 PCSK1P29120 753 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 GNA15P30679 374 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 TAP1Q03518 808 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 KLHL30Q0D2K2 578 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 ORC1Q13415 861 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 RTP2Q5QGT7 225 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 ZNF280DQ6N043 979 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 SPRED2Q7Z698 418 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 ACOT1Q86TX2 421 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 NOP9Q86U38 636 aaKnown RBP13.48□□□□□ -0.25
CMTM4-203ENST00000561680 CRYBG2Q8N1P7 616 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 KLHL23Q8NBE8 558 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 B3GALNT2Q8NCR0 500 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 CCDC112Q8NEF3 446 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 OLIG1Q8TAK6 271 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 DDX1Q92499 740 aaKnown RBP13.48□□□□□ -0.25
CMTM4-203ENST00000561680 TNIP3Q96KP6 325 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 B3GALT6Q96L58 329 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 TGS1Q96RS0 853 aaKnown RBP13.48□□□□□ -0.25
CMTM4-203ENST00000561680 SYT15Q9BQS2 421 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 ACBD6Q9BR61 282 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 C17orf80Q9BSJ5 609 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 SYT11Q9BT88 431 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 DNAI2Q9GZS0 605 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 CHST7Q9NS84 486 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 ARHGAP20Q9P2F6 1191 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 MSRAQ9UJ68 235 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 CDH9Q9ULB4 789 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 LZTS1Q9Y250 596 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 BZW2Q9Y6E2 419 aaKnown RBP13.48□□□□□ -0.25
CMTM4-203ENST00000561680 ANAPC1Q9H1A4 1944 aa13.48□□□□□ -0.25
CMTM4-203ENST00000561680 DOCK6Q96HP0 2047 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 SSU72P8A0A1W2PR75 194 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 H7C4K7 107 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 RB1P06400 928 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 PLEKP08567 350 aaPredicted RBP13.47□□□□□ -0.25
CMTM4-203ENST00000561680 PDGFRBP09619 1106 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 VDRP11473 427 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 ACAT1P24752 427 aaKnown RBP13.47□□□□□ -0.25
CMTM4-203ENST00000561680 GLUD2P49448 558 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 ERVK-21P61565 698 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 PSMC1P62191 440 aaKnown RBP13.47□□□□□ -0.25
CMTM4-203ENST00000561680 DSG1Q02413 1049 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 KRT17Q04695 432 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
CMTM4-203ENST00000561680 TDRD12Q587J7 1177 aaKnown RBP13.47□□□□□ -0.25
CMTM4-203ENST00000561680 INTS6LQ5JSJ4 861 aaKnown RBP13.47□□□□□ -0.25
CMTM4-203ENST00000561680 KIAA0319Q5VV43 1072 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 CYP26C1Q6V0L0 522 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 ANKS3Q6ZW76 656 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 CEP57Q86XR8 500 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 ZNF677Q86XU0 584 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 GPR65Q8IYL9 337 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 THEM5Q8N1Q8 247 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 OR10T2Q8NGX3 314 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 SLC20A1Q8WUM9 679 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 PIK3R5Q8WYR1 880 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 TFAP2BQ92481 460 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 PKMYT1Q99640 499 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 CHP1Q99653 195 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 BAG1Q99933 345 aaPredicted RBP13.47□□□□□ -0.25
CMTM4-203ENST00000561680 ZSWIM1Q9BR11 485 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 OXCT2Q9BYC2 517 aaPredicted RBP13.47□□□□□ -0.25
CMTM4-203ENST00000561680 ZBP1Q9H171 429 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 NKX2-4Q9H2Z4 354 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 HAUS4Q9H6D7 363 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 CRTAC1Q9NQ79 661 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 MTRRQ9UBK8 725 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 KIAA1257Q9ULG3 409 aa13.47□□□□□ -0.25
CMTM4-203ENST00000561680 A0A1W2PPC1 479 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 OR6C75A6NL08 312 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms