RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 DNAI1Q9UI46 699 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 STXBP5LQ9Y2K9 1186 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 DUSP10Q9Y6W6 482 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 ALPK3Q96L96 1907 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 CTAGE9A4FU28 777 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 TBKBP1A7MCY6 615 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 TMEM189-UBE2V1I3L0A0 370 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 TADA2AO75478 443 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 BAIAP3O94812 1187 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 DDHD2O94830 711 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 UPP2O95045 317 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 CALCAP01258 141 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 PDGFRBP09619 1106 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 CSF2RAP15509 400 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 ABCB4P21439 1286 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 BRD2P25440 801 aaKnown RBP10.94□□□□□ -0.66
USP3-219ENST00000561326 PCSK1P29120 753 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 OR1G1P47890 313 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 AARSP49588 968 aaKnown RBP eCLIP10.94□□□□□ -0.66
USP3-219ENST00000561326 CENPCQ03188 943 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 PPIGQ13427 754 aaKnown RBP eCLIP10.94□□□□□ -0.664e-6■■■□□ 16
USP3-219ENST00000561326 TUBB2AQ13885 445 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 NAA35Q5VZE5 725 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 WSCD1Q658N2 575 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 ACOT1Q86TX2 421 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 ERICH1Q86X53 443 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 ZNF280BQ86YH2 543 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 PHF13Q86YI8 300 aaPredicted RBP10.94□□□□□ -0.66
USP3-219ENST00000561326 COLGALT2Q8IYK4 626 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 SYCE1Q8N0S2 351 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 CRIPAKQ8N1N5 446 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 PDCL2Q8N4E4 241 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 CPA5Q8WXQ8 436 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 RFFLQ8WZ73 363 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 TFAP2BQ92481 460 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 SUSD3Q96L08 255 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 HTATIP2Q9BUP3 242 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 TUBB2BQ9BVA1 445 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 PACSIN1Q9BY11 444 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 IL23AQ9NPF7 189 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 TAS2R14Q9NYV8 317 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 ADAM22Q9P0K1 906 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 HESX1Q9UBX0 185 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 L1RE1Q9UN81 338 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 TFR2Q9UP52 801 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 FAN1Q9Y2M0 1017 aa10.94□□□□□ -0.66
USP3-219ENST00000561326 A0A0U1RQJ8 604 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 M0QZQ0 153 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 GABRDO14764 452 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 ABL1P00519 1130 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 FGBP02675 491 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 CYP11A1P05108 521 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 CALB1P05937 261 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 PTPN1P18031 435 aaKnown RBP10.93□□□□□ -0.66
USP3-219ENST00000561326 TYMPP19971 482 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 CDH5P33151 784 aaPredicted RBP10.93□□□□□ -0.66
USP3-219ENST00000561326 ALDH7A1P49419 539 aaKnown RBP10.93□□□□□ -0.66
USP3-219ENST00000561326 SLC8A3P57103 927 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 NOMO3P69849 1222 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 C1QBPQ07021 282 aaKnown RBP10.93□□□□□ -0.66
USP3-219ENST00000561326 TCEAL1Q15170 157 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 TCTN1Q2MV58 587 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 TIGD5Q53EQ6 642 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 ARHGAP17Q68EM7 881 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 LCLAT1Q6UWP7 414 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.93□□□□□ -0.66
USP3-219ENST00000561326 PALB2Q86YC2 1186 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 OLIG1Q8TAK6 271 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 SLC35G2Q8TBE7 412 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 KBTBD7Q8WVZ9 684 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 ATRIPQ8WXE1 791 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 TOP1MTQ969P6 601 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 TWNKQ96RR1 684 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 PAAF1Q9BRP4 392 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 TMEM175Q9BSA9 504 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 IRX2Q9BZI1 471 aaPredicted RBP10.93□□□□□ -0.66
USP3-219ENST00000561326 THAP2Q9H0W7 228 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 NRDE2Q9H7Z3 1164 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 MRPL47Q9HD33 250 aaKnown RBP10.93□□□□□ -0.66
USP3-219ENST00000561326 CTTNBP2NLQ9P2B4 639 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 UVRAGQ9P2Y5 699 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 TRIM10Q9UDY6 481 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 GTF3C4Q9UKN8 822 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 STRIP2Q9ULQ0 834 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.93□□□□□ -0.66
USP3-219ENST00000561326 JRKLQ9Y4A0 524 aa10.93□□□□□ -0.66
USP3-219ENST00000561326 NCANO14594 1321 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 M0QYV0 167 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 O00370 1275 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 NRP1O14786 923 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 BUB1O43683 1085 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 DGKIO75912 1065 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 MICAL2O94851 1124 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 MOCS3O95396 460 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 CYP1A2P05177 515 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 SETSIPP0DME0 302 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 LMO2P25791 158 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 HADHBP55084 474 aaKnown RBP10.92□□□□□ -0.66
USP3-219ENST00000561326 FPGSQ05932 587 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 ELAVL2Q12926 359 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms