RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 SNRPB2P08579 225 aaKnown RBP7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 PAEPP09466 180 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 ATP6V1B1P15313 513 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 XBP1P17861 261 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 POLE2P56282 527 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 NRG1Q02297 640 aaPredicted RBP7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 ITIH3Q06033 890 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 PDE4BQ07343 736 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 C2orf54Q08AI8 447 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 HSP90AA4PQ58FG1 418 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 APOA5Q6Q788 366 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 SESTD1Q86VW0 696 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 ELOA2Q8IYF1 753 aaPredicted RBP7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 RNF168Q8IYW5 571 aaPredicted RBP7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 SMYD1Q8NB12 490 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 MLKLQ8NB16 471 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 NSUN7Q8NE18 718 aaKnown RBP7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 GPBAR1Q8TDU6 330 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 UTP15Q8TED0 518 aaKnown RBP7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 LZICQ8WZA0 190 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 KIFAP3Q92845 792 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 ITPKCQ96DU7 683 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 SYT15Q9BQS2 421 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 TMEM60Q9H2L4 133 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 IGFLR1Q9H665 355 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 NOL6Q9H6R4 1146 aaKnown RBP7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 HMG20BQ9P0W2 317 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 SEL1LQ9UBV2 794 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 RPS6KA6Q9UK32 745 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 SCAF8Q9UPN6 1271 aaKnown RBP7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 TMEM98Q9Y2Y6 226 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 ZNF451Q9Y4E5 1061 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 LRRC42Q9Y546 428 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 LAMB4A4D0S4 1761 aa7.15□□□□□ -1.27
TSPAN3-209ENST00000560715 IFIT3O14879 490 aaKnown RBP7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 AKR1B10O60218 316 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 KDM1AO60341 852 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 MAFKO60675 156 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 EFCAB14O75071 495 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 DDX58O95786 925 aaKnown RBP7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 GUCA1CO95843 209 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 TMEM253P0C7T8 217 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 NME2P22392 152 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 PBX1P40424 430 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 TECP42680 631 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 LSSP48449 732 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 HSPA7P48741 367 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 UBXN2AP68543 259 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 CUL4BQ13620 913 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 CHRNA2Q15822 529 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 TMEM177Q53S58 311 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 PGBD2Q6P3X8 592 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 ERICH1Q86X53 443 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 CREG2Q8IUH2 290 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 FAM13CQ8NE31 585 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 HDAC7Q8WUI4 952 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 NXPE3Q969Y0 559 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 NDNQ99608 321 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 CNPPD1Q9BV87 410 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 SLC12A6Q9UHW9 1150 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 AKT3Q9Y243 479 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 CLIC4Q9Y696 253 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 BZW2Q9Y6E2 419 aaKnown RBP7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 ZMYM6O95789 1325 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 GOLGA6L10A0A0M3HER8 536 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 POTEB3A0JP26 581 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 TNFRSF10CO14798 259 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 NQO1P15559 274 aaKnown RBP7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 PORP16435 677 aaPredicted RBP7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 NFKB1P19838 968 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 SP100P23497 879 aaPredicted RBP7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 HOXD13P35453 343 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 STAT6P42226 847 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 SYKP43405 635 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 ERVK-24P63145 666 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 PNOCQ13519 176 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 CLEC16AQ2KHT3 1053 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 POTEBQ6S5H4 581 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 CCDC80Q76M96 950 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 PRICKLE2Q7Z3G6 844 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 ZNF572Q7Z3I7 529 aaPredicted RBP7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 PPP1R42Q7Z4L9 355 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 MREGQ8N565 214 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 SMCR8Q8TEV9 937 aaPredicted RBP7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 XAGE3Q8WTP9 111 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 C1orf159Q96HA4 380 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 CCDC43Q96MW1 224 aaKnown RBP7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 LRRC1Q9BTT6 524 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 TAF1DQ9H5J8 278 aaPredicted RBP7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 HAUS4Q9H6D7 363 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 CABP5Q9NP86 173 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 GUCA1BQ9UMX6 200 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 MINPP1Q9UNW1 487 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 MAP3K2Q9Y2U5 619 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 F8VZ95 297 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 AP3D1O14617 1153 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 SOAT2O75908 522 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 FLOT1O75955 427 aa7.14□□□□□ -1.27
TSPAN3-209ENST00000560715 MX2P20592 715 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms