RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 SLC7A14Q8TBB6 771 aa16.6■□□□□ 0.25
LYSMD2-204ENST00000560491 SPATA18Q8TC71 538 aa16.6■□□□□ 0.25
LYSMD2-204ENST00000560491 S1PR5Q9H228 398 aa16.6■□□□□ 0.25
LYSMD2-204ENST00000560491 CRISPLD1Q9H336 500 aa16.6■□□□□ 0.25
LYSMD2-204ENST00000560491 SFXN1Q9H9B4 322 aa16.6■□□□□ 0.25
LYSMD2-204ENST00000560491 TMLHEQ9NVH6 421 aa16.6■□□□□ 0.25
LYSMD2-204ENST00000560491 MAGEC2Q9UBF1 373 aaPredicted RBP16.6■□□□□ 0.25
LYSMD2-204ENST00000560491 COQ4Q9Y3A0 265 aa16.6■□□□□ 0.25
LYSMD2-204ENST00000560491 MTMR11A4FU01 709 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 GRXCR2A6NFK2 248 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 ATP2C2O75185 946 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 C1RP00736 705 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 PDGFRBP09619 1106 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 P4HA1P13674 534 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 ATF2P15336 505 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 HOXB8P17481 243 aaPredicted RBP16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 TSPY1Q01534 308 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 LRMPQ12912 555 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 INTS6LQ5JSJ4 861 aaKnown RBP16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 CDKAL1Q5VV42 579 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 TPGS2Q68CL5 300 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 TTC9BQ8N6N2 239 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 HDAC7Q8WUI4 952 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 TATDN2Q93075 761 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 SYT15Q9BQS2 421 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 ACBD6Q9BR61 282 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 BCO2Q9BYV7 579 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 NIF3L1Q9GZT8 377 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 SNX25Q9H3E2 840 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 DPEP3Q9H4B8 488 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 PLEKHA4Q9H4M7 779 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 CYP4F11Q9HBI6 524 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 FANCLQ9NW38 375 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 AFF4Q9UHB7 1163 aaKnown RBP16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 DPP7Q9UHL4 492 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 C5orf42Q9H799 3197 aa16.59■□□□□ 0.25
LYSMD2-204ENST00000560491 TCF20Q9UGU0 1960 aaKnown RBP16.58■□□□□ 0.25
LYSMD2-204ENST00000560491 PRRG1O14668 218 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 PMM2O15305 246 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 MBTPS2O43462 519 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 ZMYND10O75800 440 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 PCSK1P29120 753 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 GNL1P36915 607 aaPredicted RBP16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 ORC1Q13415 861 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 SMAD4Q13485 552 aaKnown RBP16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 NCAPHQ15003 741 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 MAN2A1Q16706 1144 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 TCP11X2Q5H9J9 407 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 WDR44Q5JSH3 913 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 PPM1LQ5SGD2 360 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 PTCRAQ6ISU1 281 aaPredicted RBP16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 ELMSAN1Q6PJG2 1045 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 ATAD1Q8NBU5 361 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 ATXN2LQ8WWM7 1075 aaKnown RBP16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 PKMYT1Q99640 499 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 ARID3AQ99856 593 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 LPIN3Q9BQK8 851 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 TUBGCP2Q9BSJ2 902 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 NAT10Q9H0A0 1025 aaKnown RBP16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 HMGXB4Q9UGU5 601 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 USP15Q9Y4E8 981 aaPredicted RBP16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 DENND4AQ7Z401 1863 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 PTPRDP23468 1912 aa16.58■□□□□ 0.24
LYSMD2-204ENST00000560491 CCDC195A0A1B0GUA6 201 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 MYBPHLA2RUH7 354 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 A8MXQ7 604 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 P4HA2O15460 535 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 CCL16O15467 120 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 IL9P15248 144 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 CD58P19256 250 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 ELF1P32519 619 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 MRPS5P82675 430 aaKnown RBP16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 DUSP4Q13115 394 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 CCDC149Q6ZUS6 474 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 DHX40Q8IX18 779 aaKnown RBP16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 DCP1BQ8IZD4 617 aaKnown RBP16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 LMO3Q8TAP4 145 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 ZNF707Q96C28 371 aaPredicted RBP16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 BPIFA3Q9BQP9 254 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 HSD3B7Q9H2F3 369 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 ADAM7Q9H2U9 754 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 CRTAC1Q9NQ79 661 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 ABI2Q9NYB9 513 aaPredicted RBP16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 TAB2Q9NYJ8 693 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 GTF3C4Q9UKN8 822 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 CDH9Q9ULB4 789 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 SLC27A5Q9Y2P5 690 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 INSL5Q9Y5Q6 135 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 DOCK6Q96HP0 2047 aa16.57■□□□□ 0.24
LYSMD2-204ENST00000560491 SOAT2O75908 522 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 FAM163BP0C2L3 166 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 EEF1GP26641 437 aaKnown RBP16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 ZNF165P49910 485 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 CETN1Q12798 172 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 AAK1Q2M2I8 961 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 VWA3BQ502W6 1294 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 MIIPQ5JXC2 388 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 CES5AQ6NT32 575 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms