RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SPOPO43791 374 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 MICAL2O94851 1124 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 PROSCO94903 275 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 GHRP10912 638 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 RAB27AP51159 221 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 PAK2Q13177 524 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 ORC1Q13415 861 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 STILQ15468 1287 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 CLUL1Q15846 466 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 SOWAHAQ2M3V2 549 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 ZNF618Q5T7W0 954 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 CCDC70Q6NSX1 233 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 LCLAT1Q6UWP7 414 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 PHLDB2Q86SQ0 1253 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 FEZF2Q8TBJ5 459 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 HNRNPLLQ8WVV9 542 aaKnown RBP13.46□□□□□ -0.26
USP3-213ENST00000559711 KRT35Q92764 455 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 TRIM7Q9C029 511 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 SLC38A7Q9NVC3 462 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 CYTH4Q9UIA0 394 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 LCMT1Q9UIC8 334 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 PHF24Q9UPV7 400 aa13.46□□□□□ -0.26
USP3-213ENST00000559711 RALGAPA2Q2PPJ7 1873 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 A0A0U1RQF3 1178 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 A0A0U1RQG5 324 aaPredicted RBP13.45□□□□□ -0.26
USP3-213ENST00000559711 TMEM191CA6NGB0 347 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 MEIS3P2A8K0S8 358 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 SPTLC1O15269 473 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 MGEA5O60502 916 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 FAM163BP0C2L3 166 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 GPD2P43304 727 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 TAF6P49848 677 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 GSCP56915 257 aaPredicted RBP13.45□□□□□ -0.26
USP3-213ENST00000559711 RNASE9P60153 205 aaKnown RBP13.45□□□□□ -0.26
USP3-213ENST00000559711 PPP1R15BQ5SWA1 713 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 TRAF7Q6Q0C0 670 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 AGMOQ6ZNB7 445 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 C3orf20Q8ND61 904 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 RUBCNQ92622 972 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 ZFP42Q96MM3 310 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 LRRC1Q9BTT6 524 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 SEZ6LQ9BYH1 1024 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 TRPV6Q9H1D0 765 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 STRIP2Q9ULQ0 834 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 TRIM17Q9Y577 477 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 DNAH12Q6ZR08 3092 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 CITO14578 2027 aa13.45□□□□□ -0.26
USP3-213ENST00000559711 ARVCFO00192 962 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 CKBP12277 381 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 MCM3P25205 808 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 MAN1A1P33908 653 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 GABRB2P47870 512 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 MARCKSL1P49006 195 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 LILRA4P59901 499 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 VSNL1P62760 191 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 TAP1Q03518 808 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 SV2CQ496J9 727 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 PTPN20Q4JDL3 420 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 DPH6Q7L8W6 267 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 CPNE8Q86YQ8 564 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 CRYBG2Q8N1P7 616 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 KBTBD7Q8WVZ9 684 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 RNPC3Q96LT9 517 aaKnown RBP13.44□□□□□ -0.26
USP3-213ENST00000559711 GAD1Q99259 594 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 NAP1L3Q99457 506 aaPredicted RBP13.44□□□□□ -0.26
USP3-213ENST00000559711 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.44□□□□□ -0.26
USP3-213ENST00000559711 GOLGA2P5Q9HBQ8 144 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 STARD7Q9NQZ5 370 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 NME7Q9Y5B8 376 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 ARL5CA6NH57 179 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 CCDC188H7C350 402 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 FGGP02679 453 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 THP07101 528 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 MLH1P40692 756 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 RWDD2BP57060 319 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 ZNF268Q14587 947 aaPredicted RBP13.44□□□□□ -0.26
USP3-213ENST00000559711 CC2D1AQ6P1N0 951 aaPredicted RBP13.44□□□□□ -0.26
USP3-213ENST00000559711 DNAJC24Q6P3W2 148 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 TMCO3Q6UWJ1 677 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 C18orf8Q96DM3 657 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 ZNF446Q9NWS9 450 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 MIOSQ9NXC5 875 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 WDR35Q9P2L0 1181 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 IP6K2Q9UHH9 426 aa13.44□□□□□ -0.26
USP3-213ENST00000559711 SIGLEC16A6NMB1 481 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 M0QYV0 167 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 KRIT1O00522 736 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 ZRANB2O95218 330 aaKnown RBP eCLIP13.43□□□□□ -0.26
USP3-213ENST00000559711 FGFR1P11362 822 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 SKIP12755 728 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 GNL1P36915 607 aaPredicted RBP13.43□□□□□ -0.26
USP3-213ENST00000559711 CDK7P50613 346 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 RPL7AP62424 266 aaKnown RBP13.43□□□□□ -0.26
USP3-213ENST00000559711 PKDCCQ504Y2 493 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 ARHGAP17Q68EM7 881 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 TOP6BLQ8N6T0 577 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 C12orf29Q8N999 325 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 OR6B3Q8NGW1 331 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.43□□□□□ -0.26
USP3-213ENST00000559711 HDAC7Q8WUI4 952 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms