RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 PRR14Q9BWN1 585 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 OSBPL6Q9BZF3 934 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 ZCWPW1Q9H0M4 648 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 TRPV4Q9HBA0 871 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 TRPV5Q9NQA5 729 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 ASAH2Q9NR71 780 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 GDAP2Q9NXN4 497 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 CEP72Q9P209 647 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 ZMYM5Q9UJ78 669 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 R3HCC1Q9Y3T6 440 aaKnown RBP10.9□□□□□ -0.66
USP3-207ENST00000558218 SCN1AP35498 2009 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 MTMR11A4FU01 709 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 KRBA1A5PL33 1030 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 SOBPA7XYQ1 873 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 PRPF40AO75400 957 aaKnown RBP10.89□□□□□ -0.67
USP3-207ENST00000558218 WEE1P30291 646 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 HOXD13P35453 343 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 MLLT6P55198 1093 aaPredicted RBP10.89□□□□□ -0.67
USP3-207ENST00000558218 KRT85P78386 507 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 TFAMQ00059 246 aaKnown RBP10.89□□□□□ -0.67
USP3-207ENST00000558218 MYO1EQ12965 1108 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 NFE2Q16621 373 aaPredicted RBP10.89□□□□□ -0.67
USP3-207ENST00000558218 DUOXA2Q1HG44 320 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 BMT2Q1RMZ1 405 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 SLC5A9Q2M3M2 681 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 FOXD4L5Q5VV16 416 aaPredicted RBP10.89□□□□□ -0.67
USP3-207ENST00000558218 CWF19L1Q69YN2 538 aaKnown RBP10.89□□□□□ -0.67
USP3-207ENST00000558218 HS2ST1Q7LGA3 356 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 C12orf56Q8IXR9 622 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 CEP57L1Q8IYX8 460 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 CSGALNACT2Q8N6G5 542 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 FLCNQ8NFG4 579 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 GOLGA5Q8TBA6 731 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 SPPL2BQ8TCT7 592 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 GPR152Q8TDT2 470 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 FOXD4L4Q8WXT5 416 aaPredicted RBP10.89□□□□□ -0.67
USP3-207ENST00000558218 SAAL1Q96ER3 474 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 MCRS1Q96EZ8 462 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 ACBD6Q9BR61 282 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 CBWD1Q9BRT8 395 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 RPP25Q9BUL9 199 aaKnown RBP10.89□□□□□ -0.67
USP3-207ENST00000558218 LRRC3Q9BY71 257 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 FGFBP2Q9BYJ0 223 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 SCAND2PQ9GZW5 306 aaPredicted RBP10.89□□□□□ -0.67
USP3-207ENST00000558218 IKZF4Q9H2S9 585 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 ZFP14Q9HCL3 533 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 ARHGEF3Q9NR81 526 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 INTS13Q9NVM9 706 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 AGAP1Q9UPQ3 857 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 YIPF1Q9Y548 306 aa10.89□□□□□ -0.67
USP3-207ENST00000558218 CACNA1HO95180 2353 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 FAM237AA0A1B0GTK4 181 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 PROB1E7EW31 1015 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 TGFB1I1O43294 461 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 HUS1O60921 280 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 VNN2O95498 520 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 MAGEA9P43362 315 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 LHX1P48742 406 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 PKP1Q13835 747 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 SLC44A4Q53GD3 710 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 WSCD1Q658N2 575 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 DNAJB7Q7Z6W7 309 aaPredicted RBP10.88□□□□□ -0.67
USP3-207ENST00000558218 WDR49Q8IV35 697 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 CCDC105Q8IYK2 499 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 TOP6BLQ8N6T0 577 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 C1orf127Q8N9H9 656 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 XXYLT1Q8NBI6 393 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 ATAD1Q8NBU5 361 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 CXorf38Q8TB03 319 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 DEPDC1BQ8WUY9 529 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 SCFD1Q8WVM8 642 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 DNASE1L2Q92874 299 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 SMARCD2Q92925 531 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 PSMG2Q969U7 264 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 ANKRD36BP1Q96IX9 119 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 ASB16Q96NS5 453 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 DDX23Q9BUQ8 820 aaKnown RBP10.88□□□□□ -0.67
USP3-207ENST00000558218 PCIF1Q9H4Z3 704 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 PDE11AQ9HCR9 933 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 ABCB6Q9NP58 842 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 HSPBP1Q9NZL4 362 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 SIT1Q9Y3P8 196 aa10.88□□□□□ -0.67
USP3-207ENST00000558218 GOLGA8IPA6NC78 632 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 GOLGA8JA6NMD2 632 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 GABRDO14764 452 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 PI15O43692 258 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 MOSPD3O75425 235 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 TNNC2P02585 160 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 ITGB3P05106 788 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 OR4Q2P0C623 313 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 TMEM191BP0C7N4 346 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 HAPLN1P10915 354 aaPredicted RBP10.87□□□□□ -0.67
USP3-207ENST00000558218 MYL4P12829 197 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 GLULP15104 373 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 CEBPBP17676 345 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 PSMC3P17980 439 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 RFX1P22670 979 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 POLR2BP30876 1174 aaKnown RBP10.87□□□□□ -0.67
USP3-207ENST00000558218 CCR2P41597 374 aa10.87□□□□□ -0.67
USP3-207ENST00000558218 MRE11P49959 708 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms