RNA–Protein interactions for RNA: ENST00000557519.1

RPS29-208, Transcript of ribosomal protein S29, human

TSL 3

Gene RPS29, Length 333 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS29-208	ENST00000557519	PARD3B	Q8TEW8	1205 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	TAF4B	Q92750	862 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	FGF13	Q92913	245 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	E2F7	Q96AV8	911 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	FUBP3	Q96I24	572 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	MYADM	Q96S97	322 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	PRRX2	Q99811	253 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	SLITRK6	Q9H5Y7	841 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	ABI2	Q9NYB9	513 aa	Predicted RBP	10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	EHD2	Q9NZN4	543 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	DNMT3B	Q9UBC3	853 aa	Known RBP	10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	SIX4	Q9UIU6	781 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	CDH9	Q9ULB4	789 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	L1RE1	Q9UN81	338 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	DUSP12	Q9UNI6	340 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	DOCK8	Q8NF50	2099 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	MYO10	Q9HD67	2058 aa		10.44	□□□□□ -0.74
RPS29-208	ENST00000557519	BICDL2	A1A5D9	508 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	FAM86C2P	A6NEL3	165 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	GOLGA6L22	H0YM25	854 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	SLC16A3	O15427	465 aa	Known RBP	10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	TACC1	O75410	805 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	SEC24A	O95486	1093 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	ASGR2	P07307	311 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	SRF	P11831	508 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	ANXA13	P27216	316 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	CDC25C	P30307	473 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	PIK3CA	P42336	1068 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	VAMP7	P51809	220 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	CLDN10	P78369	228 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	FKBP3	Q00688	224 aa	Known RBP	10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	PFKP	Q01813	784 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	NCOA4	Q13772	614 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	SGSM1	Q2NKQ1	1148 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	INTS6L	Q5JSJ4	861 aa	Known RBP	10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	BMP8A	Q7Z5Y6	402 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	OR10T2	Q8NGX3	314 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	PSMG2	Q969U7	264 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	PBXIP1	Q96AQ6	731 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	BORCS6	Q96GS4	357 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	CEP295NL	Q96MC4	621 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	GBP4	Q96PP9	640 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	SYT15	Q9BQS2	421 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	LRFN3	Q9BTN0	628 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	KCNH6	Q9H252	994 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	HCFC1R1	Q9NWW0	138 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	UXT	Q9UBK9	157 aa	Predicted RBP	10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	MAPK8IP1	Q9UQF2	711 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	PCDHA5	Q9Y5H7	936 aa		10.43	□□□□□ -0.74
RPS29-208	ENST00000557519	PTPRJ	Q12913	1337 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	FGFR1OP	O95684	399 aa	Known RBP	10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	CSH1	P0DML2	217 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	CSH2	P0DML3	217 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	MYL4	P12829	197 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	WARS	P23381	471 aa	Known RBP	10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	GTF2H1	P32780	548 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	GNL1	P36915	607 aa	Predicted RBP	10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	EPHA5	P54756	1037 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	NTHL1	P78549	312 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	SOWAHA	Q2M3V2	549 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	CFAP221	Q4G0U5	840 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	NPAS3	Q8IXF0	933 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	TMEM130	Q8N3G9	435 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	TTC39C	Q8N584	583 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	TRIML1	Q8N9V2	468 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	ATAD1	Q8NBU5	361 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	OR6B3	Q8NGW1	331 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	CXorf38	Q8TB03	319 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	SPATA20	Q8TB22	786 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	ITFG1	Q8TB96	612 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	TNIP3	Q96KP6	325 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	VRTN	Q9H8Y1	702 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	NXF1	Q9UBU9	619 aa	Known RBP	10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	SLC27A5	Q9Y2P5	690 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519	NUMBL	Q9Y6R0	609 aa		10.42	□□□□□ -0.74
RPS29-208	ENST00000557519		A8MXQ7	604 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	ANHX	E9PGG2	379 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	DPYSL4	O14531	572 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	GABRD	O14764	452 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	TRIM66	O15016	1216 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	N4BP1	O75113	896 aa	Known RBP	10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	ECI2	O75521	394 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	HAPLN1	P10915	354 aa	Predicted RBP	10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	DDX6	P26196	483 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	PRCP	P42785	496 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	MAGEA11	P43364	429 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	PDE6C	P51160	858 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	NUBP1	P53384	320 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	MYL6	P60660	151 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	CETN1	Q12798	172 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	HTR4	Q13639	388 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	ZACN	Q401N2	412 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	PRSS36	Q5K4E3	855 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	TDRD10	Q5VZ19	366 aa	Known RBP	10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	KRT39	Q6A163	491 aa		10.41	□□□□□ -0.74
RPS29-208	ENST00000557519	VSTM1	Q6UX27	236 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms