RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 KPNA1P52294 538 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-213ENST00000557262 TFAMQ00059 246 aaKnown RBP17.13■□□□□ 0.33
TUBB3-213ENST00000557262 ARHGAP29Q52LW3 1261 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 C1orf228Q6PIY5 440 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 BRSK2Q8IWQ3 736 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 ZSWIM2Q8NEG5 633 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 GIPC2Q8TF65 315 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 SAAL1Q96ER3 474 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 MSANTD3Q96H12 275 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 LRRC3BQ96PB8 259 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 AGAP1Q9UPQ3 857 aa17.13■□□□□ 0.33
TUBB3-213ENST00000557262 ANK1P16157 1881 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 OTOGLQ3ZCN5 2332 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 A0A087X0B3 334 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 FRMD3A2A2Y4 597 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 CHRNB1P11230 501 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 CDC25CP30307 473 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 CASP5P51878 434 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 NRLP54845 237 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 WNT7BP56706 349 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 PPP2R5DQ14738 602 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 CSGALNACT2Q8N6G5 542 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 TMEM206Q9H813 350 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 IL21Q9HBE4 155 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 ABI2Q9NYB9 513 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-213ENST00000557262 ZMYM5Q9UJ78 669 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 PCDHB5Q9Y5E4 795 aa17.12■□□□□ 0.33
TUBB3-213ENST00000557262 GOLGA8IPA6NC78 632 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 GOLGA8JA6NMD2 632 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 STX6O43752 255 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 EXTL3O43909 919 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 HUS1O60921 280 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 PRPF6O94906 941 aaKnown RBP17.11■□□□□ 0.33
TUBB3-213ENST00000557262 ITGB3P05106 788 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 POLR2BP30876 1174 aaKnown RBP17.11■□□□□ 0.33
TUBB3-213ENST00000557262 NASPP49321 788 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-213ENST00000557262 CCR3P51677 355 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 CYP4F8P98187 520 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 TSPY1Q01534 308 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 CCDC65Q8IXS2 484 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 PDILTQ8N807 584 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 C1orf127Q8N9H9 656 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 BPIFB1Q8TDL5 484 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 GCNAQ96QF7 691 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 ACBD6Q9BR61 282 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 SLC46A2Q9BY10 475 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 LRRC27Q9C0I9 530 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 PCIF1Q9H4Z3 704 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 RBAKQ9NYW8 714 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-213ENST00000557262 NCDNQ9UBB6 729 aa17.11■□□□□ 0.33
TUBB3-213ENST00000557262 MYBPHLA2RUH7 354 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 SLC38A8A6NNN8 435 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 KIAA0391O15091 583 aaKnown RBP17.1■□□□□ 0.33
TUBB3-213ENST00000557262 CXCL12P48061 93 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 RBP5P82980 135 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 PLCB2Q00722 1185 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 STK38Q15208 465 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 NFE2Q16621 373 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-213ENST00000557262 RALGPS2Q86X27 583 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-213ENST00000557262 TMEM86AQ8N2M4 240 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 PDCL2Q8N4E4 241 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 CELF5Q8N6W0 485 aaKnown RBP17.1■□□□□ 0.33
TUBB3-213ENST00000557262 LRRC52Q8N7C0 313 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 LINC00301Q8NCQ3 95 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 SECISBP2LQ93073 1101 aaKnown RBP17.1■□□□□ 0.33
TUBB3-213ENST00000557262 RMDN1Q96DB5 314 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 CBWD1Q9BRT8 395 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 FGFBP2Q9BYJ0 223 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 EPC1Q9H2F5 836 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 PDE11AQ9HCR9 933 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 TMLHEQ9NVH6 421 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 THG1LQ9NWX6 298 aaKnown RBP17.1■□□□□ 0.33
TUBB3-213ENST00000557262 GTSE1Q9NYZ3 720 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 ITGA11Q9UKX5 1188 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 COL4A2P08572 1712 aa17.1■□□□□ 0.33
TUBB3-213ENST00000557262 TICRRQ7Z2Z1 1910 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 GPR179Q6PRD1 2367 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 SPECC1L-ADORA2AF8WAN1 911 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 K7ELQ4 463 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-213ENST00000557262 PRPF40AO75400 957 aaKnown RBP17.09■□□□□ 0.33
TUBB3-213ENST00000557262 F11P03951 625 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 TDGF1P13385 188 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 HMGA1P17096 107 aaKnown RBP17.09■□□□□ 0.33
TUBB3-213ENST00000557262 SOX9P48436 509 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 LRRC32Q14392 662 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 DGKKQ5KSL6 1271 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 STXBP4Q6ZWJ1 553 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 CMTM8Q8IZV2 173 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 GPD1LQ8N335 351 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 SPEM1Q8N4L4 309 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 GPR161Q8N6U8 529 aaKnown RBP17.09■□□□□ 0.33
TUBB3-213ENST00000557262 TTC8Q8TAM2 541 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 CXorf38Q8TB03 319 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 NOC3LQ8WTT2 800 aaKnown RBP17.09■□□□□ 0.33
TUBB3-213ENST00000557262 ZFYVE19Q96K21 471 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 PI4K2AQ9BTU6 479 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 BACH2Q9BYV9 841 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 GDAP2Q9NXN4 497 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 DDX43Q9NXZ2 648 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms