RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 MOV10L1Q9BXT6 1211 aaKnown RBP4.59□□□□□ -1.67
ATXN3-240ENST00000556339 SPATC1LQ9H0A9 340 aa4.59□□□□□ -1.67
ATXN3-240ENST00000556339 MROH8Q9H579 483 aa4.59□□□□□ -1.67
ATXN3-240ENST00000556339 KANSL2Q9H9L4 492 aa4.59□□□□□ -1.67
ATXN3-240ENST00000556339 ZNF287Q9HBT7 754 aa4.59□□□□□ -1.67
ATXN3-240ENST00000556339 PARPBPQ9NWS1 579 aa4.59□□□□□ -1.67
ATXN3-240ENST00000556339 UCKL1Q9NWZ5 548 aa4.59□□□□□ -1.67
ATXN3-240ENST00000556339 BTBD7Q9P203 1132 aa4.59□□□□□ -1.67
ATXN3-240ENST00000556339 Q9UFV3 132 aa4.59□□□□□ -1.67
ATXN3-240ENST00000556339 DDX20Q9UHI6 824 aaKnown RBP4.59□□□□□ -1.67
ATXN3-240ENST00000556339 BAZ2AQ9UIF9 1905 aaKnown RBP4.59□□□□□ -1.67
ATXN3-240ENST00000556339 ATP11BQ9Y2G3 1177 aa4.59□□□□□ -1.67
ATXN3-240ENST00000556339 PCDHA8Q9Y5H6 950 aa4.59□□□□□ -1.67
ATXN3-240ENST00000556339 MYH8P13535 1937 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 CYP2D7A0A087X1C5 515 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 A0A1W2PRG0 241 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 GOLGA6L22H0YM25 854 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 MATN2O00339 956 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 EPB41L2O43491 1005 aaKnown RBP4.58□□□□□ -1.68
ATXN3-240ENST00000556339 CNMDO75829 334 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 SLC25A27O95847 323 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 SLC3A2P08195 630 aaKnown RBP4.58□□□□□ -1.68
ATXN3-240ENST00000556339 EEF2P13639 858 aaKnown RBP4.58□□□□□ -1.68
ATXN3-240ENST00000556339 GUCY1A2P33402 732 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 DDIT3P35638 169 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 STAT3P40763 770 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 ADCYAP1R1P41586 468 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 TDO2P48775 406 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 JAM2P57087 298 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 CD83Q01151 205 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 KRTAP1-1Q07627 177 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 IKQ13123 557 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-240ENST00000556339 KCTD2Q14681 263 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 EIF4HQ15056 248 aaKnown RBP4.58□□□□□ -1.68
ATXN3-240ENST00000556339 UBE3CQ15386 1083 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 LRRC26Q2I0M4 334 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 MAP3K21Q5TCX8 1036 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 C12orf60Q5U649 245 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 CTR9Q6PD62 1173 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 NOL8Q76FK4 1167 aaKnown RBP4.58□□□□□ -1.68
ATXN3-240ENST00000556339 ADGRE4PQ86SQ3 457 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 SKAP1Q86WV1 359 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 ZC3H7AQ8IWR0 971 aaKnown RBP4.58□□□□□ -1.68
ATXN3-240ENST00000556339 TDHQ8IZJ6 230 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 CPXCR1Q8N123 301 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 HIPK4Q8NE63 616 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 LPAR1Q92633 364 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 USP6NLQ92738 828 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 PTPRN2Q92932 1015 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 FERMT2Q96AC1 680 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 CHMP4CQ96CF2 233 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 ZG16BQ96DA0 208 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 GDF15Q99988 308 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 RIOK1Q9BRS2 568 aaKnown RBP4.58□□□□□ -1.68
ATXN3-240ENST00000556339 VCPKMTQ9H867 229 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 ECHDC1Q9NTX5 307 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 FLRT1Q9NZU1 646 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 CLIP2Q9UDT6 1046 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 CNPY2Q9Y2B0 182 aa4.58□□□□□ -1.68
ATXN3-240ENST00000556339 CCDC66A2RUB6 948 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 ERC2O15083 957 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 WDR46O15213 610 aaKnown RBP4.57□□□□□ -1.68
ATXN3-240ENST00000556339 RNF113AO15541 343 aaKnown RBP4.57□□□□□ -1.68
ATXN3-240ENST00000556339 SEPT4O43236 478 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 SLC26A4O43511 780 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 PGK2P07205 417 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 RARBP10826 455 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 GNAT2P19087 354 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 COPB2P35606 906 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 STAT5BP51692 787 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 NANOS3P60323 173 aaKnown RBP4.57□□□□□ -1.68
ATXN3-240ENST00000556339 SUMO1P63165 101 aaKnown RBP4.57□□□□□ -1.68
ATXN3-240ENST00000556339 GABPAQ06546 454 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 DUSP8Q13202 625 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 GRB14Q14449 540 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 FAM83BQ5T0W9 1011 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 GRAMD4Q6IC98 578 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 SLC39A5Q6ZMH5 540 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 C16orf86Q6ZW13 317 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 Q7L0L9 218 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 MRGPRGQ86SM5 289 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 RNF180Q86T96 592 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 SCUBE1Q8IWY4 988 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 ABRAQ8N0Z2 381 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 CLIP3Q96DZ5 547 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 TINF2Q9BSI4 451 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 SPATA9Q9BWV2 254 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 NACAP1Q9BZK3 213 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 PUS7LQ9H0K6 701 aaKnown RBP4.57□□□□□ -1.68
ATXN3-240ENST00000556339 OR10A5Q9H207 317 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 SPC25Q9HBM1 224 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 CBLCQ9ULV8 474 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 TMX2Q9Y320 296 aa4.57□□□□□ -1.68
ATXN3-240ENST00000556339 BRCA2P51587 3418 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 FOCADQ5VW36 1801 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 LOC285556D6RIA3 1793 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 PFASO15067 1338 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 TRBV23-1A0A0A0MS06 115 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 A0A1W2PRX2 142 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 F5H6K3 240 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms