RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 PLD1Q13393 1074 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 TSR1Q2NL82 804 aaKnown RBP12.39□□□□□ -0.43
SLIRP-205ENST00000556310 COBLL1Q53SF7 1204 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 ZNF658Q5TYW1 1059 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-205ENST00000556310 SCARA3Q6AZY7 606 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 CENPPQ6IPU0 288 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 ADGRF2Q8IZF7 708 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 ELMOD1Q8N336 334 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 TOP6BLQ8N6T0 577 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 PARD3BQ8TEW8 1205 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 SMARCE1Q969G3 411 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 GTPBP4Q9BZE4 634 aaKnown RBP12.39□□□□□ -0.43
SLIRP-205ENST00000556310 CRISPLD1Q9H336 500 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 HSFX1Q9UBD0 423 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 LIMD1Q9UGP4 676 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 MAPK8IP1Q9UQF2 711 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 FRMD4BQ9Y2L6 1034 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 PTPRDP23468 1912 aa12.39□□□□□ -0.43
SLIRP-205ENST00000556310 PRR33A8MZF0 331 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 GPR37O15354 613 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 STAU1O95793 577 aaKnown RBP12.38□□□□□ -0.43
SLIRP-205ENST00000556310 LAMP2P13473 410 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 RPL13P26373 211 aaKnown RBP12.38□□□□□ -0.43
SLIRP-205ENST00000556310 MYL7Q01449 175 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 TSPY1Q01534 308 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 SIGLEC14Q08ET2 396 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 DUSP4Q13115 394 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 EDRF1Q3B7T1 1238 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 SLC39A12Q504Y0 691 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 TRIM67Q6ZTA4 783 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 DPH6Q7L8W6 267 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 LIMS2Q7Z4I7 341 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 UBALD2Q8IYN6 164 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 SMYD4Q8IYR2 804 aaPredicted RBP12.38□□□□□ -0.43
SLIRP-205ENST00000556310 DCP1BQ8IZD4 617 aaKnown RBP12.38□□□□□ -0.43
SLIRP-205ENST00000556310 ATAD1Q8NBU5 361 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 LEMD2Q8NC56 503 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 ITFG1Q8TB96 612 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 C2orf15Q8WU43 125 aaKnown RBP12.38□□□□□ -0.43
SLIRP-205ENST00000556310 ZNF516Q92618 1163 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 ADAM33Q9BZ11 813 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
SLIRP-205ENST00000556310 IGSF9Q9P2J2 1179 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 CDH7Q9ULB5 785 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 PCDHA5Q9Y5H7 936 aa12.38□□□□□ -0.43
SLIRP-205ENST00000556310 GABRDO14764 452 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 AKAP3O75969 853 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 PTPN2P17706 415 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 PCSK1P29120 753 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 ATICP31939 592 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 LHX1P48742 406 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 EPHA5P54756 1037 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 UBE2HP62256 183 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 ENPEPQ07075 957 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 BIRC3Q13489 604 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 TRPC3Q13507 836 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 NFE2Q16621 373 aaPredicted RBP12.37□□□□□ -0.43
SLIRP-205ENST00000556310 SLC5A9Q2M3M2 681 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 SOWAHAQ2M3V2 549 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 INTS6LQ5JSJ4 861 aaKnown RBP12.37□□□□□ -0.43
SLIRP-205ENST00000556310 TDRD10Q5VZ19 366 aaKnown RBP12.37□□□□□ -0.43
SLIRP-205ENST00000556310 IQCEQ6IPM2 695 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 INTS8Q75QN2 995 aaKnown RBP12.37□□□□□ -0.43
SLIRP-205ENST00000556310 OSTM1Q86WC4 334 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 NPAS3Q8IXF0 933 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 TTC9BQ8N6N2 239 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 SPPL2BQ8TCT7 592 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 ERCC4Q92889 916 aaPredicted RBP12.37□□□□□ -0.43
SLIRP-205ENST00000556310 FGF13Q92913 245 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 NXPE3Q969Y0 559 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 SYAP1Q96A49 352 aaPredicted RBP12.37□□□□□ -0.43
SLIRP-205ENST00000556310 ZNF512Q96ME7 567 aaPredicted RBP12.37□□□□□ -0.43
SLIRP-205ENST00000556310 ACBD6Q9BR61 282 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 CORO1BQ9BR76 489 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 LRFN3Q9BTN0 628 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 DNAJC25Q9H1X3 360 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 KCNK12Q9HB15 430 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 CEP72Q9P209 647 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 MRPS23Q9Y3D9 190 aaKnown RBP12.37□□□□□ -0.43
SLIRP-205ENST00000556310 ZNF318Q5VUA4 2279 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
SLIRP-205ENST00000556310 OBSL1O75147 1896 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 TMEM221A6NGB7 291 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 ANHXE9PGG2 379 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 M0R296 226 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 ZNF197O14709 1029 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 PHACTR2O75167 634 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 MICAL2O94851 1124 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 CST3P01034 146 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-205ENST00000556310 PRCPP42785 496 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 ALDH1A3P47895 512 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 TUFMP49411 452 aaKnown RBP12.36□□□□□ -0.43
SLIRP-205ENST00000556310 EPHB3P54753 998 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 MYL6P60660 151 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 TNNC1P63316 161 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 DLG4P78352 724 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 TDGQ13569 410 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 HTR4Q13639 388 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 ZACNQ401N2 412 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms