RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 PCDHGC3Q9UN70 934 aa12.78□□□□□ -0.36
APEX1-212ENST00000556054 A0A1W2PPC1 479 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 LINC01553A4QN01 128 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 OR6C75A6NL08 312 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 F8W810 466 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 TBC1D4O60343 1298 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 LCA5LO95447 670 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 GNA15P30679 374 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 RAP1GAPP47736 663 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 PDE6CP51160 858 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 CCZ1BP86790 482 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 CCZ1P86791 482 aaPredicted RBP12.77□□□□□ -0.37
APEX1-212ENST00000556054 CDR2Q01850 454 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 GOLGA8FQ08AF8 430 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 GOLGA8DPQ0D2H9 430 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 SMARCB1Q12824 385 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 MAPRE1Q15691 268 aaKnown RBP12.77□□□□□ -0.37
APEX1-212ENST00000556054 FAM171A1Q5VUB5 890 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 ARHGAP17Q68EM7 881 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 TRIM72Q6ZMU5 477 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 ANKS3Q6ZW76 656 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 SLC47A2Q86VL8 602 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 OSTM1Q86WC4 334 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 TMEM173Q86WV6 379 aaPredicted RBP12.77□□□□□ -0.37
APEX1-212ENST00000556054 BCL7CQ8WUZ0 217 aaPredicted RBP12.77□□□□□ -0.37
APEX1-212ENST00000556054 ZNF606Q8WXB4 792 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 PIK3R5Q8WYR1 880 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 CCDC42Q96M95 316 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 TWNKQ96RR1 684 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 CHP1Q99653 195 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 AGPAT1Q99943 283 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 DDX43Q9NXZ2 648 aaKnown RBP12.77□□□□□ -0.37
APEX1-212ENST00000556054 SSX2IPQ9Y2D8 614 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 NME7Q9Y5B8 376 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 BACE2Q9Y5Z0 518 aa12.77□□□□□ -0.37
APEX1-212ENST00000556054 NT5C1B-RDH14C9J2C7 533 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 I3L4J1 428 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 FGF18O76093 207 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 PNMA6AP0CW24 399 aaPredicted RBP12.76□□□□□ -0.37
APEX1-212ENST00000556054 GZMAP12544 262 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 PTPN1P18031 435 aaKnown RBP12.76□□□□□ -0.37
APEX1-212ENST00000556054 LMO2P25791 158 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 TKTP29401 623 aaKnown RBP12.76□□□□□ -0.37
APEX1-212ENST00000556054 CYLC1P35663 651 aaPredicted RBP12.76□□□□□ -0.37
APEX1-212ENST00000556054 EIF4A3P38919 411 aaKnown RBP12.76□□□□□ -0.37
APEX1-212ENST00000556054 ERVK-21P61565 698 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 DSG1Q02413 1049 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 CREMQ03060 361 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 SGO2Q562F6 1265 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
APEX1-212ENST00000556054 C10orf76Q5T2E6 689 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 KIAA0319Q5VV43 1072 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 ZNF280DQ6N043 979 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 FAM171BQ6P995 826 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 LCLAT1Q6UWP7 414 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 ZNF571Q7Z3V5 609 aaPredicted RBP12.76□□□□□ -0.37
APEX1-212ENST00000556054 NOP9Q86U38 636 aaKnown RBP12.76□□□□□ -0.37
APEX1-212ENST00000556054 TDHQ8IZJ6 230 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 B3GALNT2Q8NCR0 500 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 SLC30A5Q8TAD4 765 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 HASPINQ8TF76 798 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 HEXIM2Q96MH2 286 aaKnown RBP12.76□□□□□ -0.37
APEX1-212ENST00000556054 RTP3Q9BQQ7 232 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 ZNF518BQ9C0D4 1074 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 LHX5Q9H2C1 402 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 NHEJ1Q9H9Q4 299 aaPredicted RBP12.76□□□□□ -0.37
APEX1-212ENST00000556054 PUF60Q9UHX1 559 aaKnown RBP12.76□□□□□ -0.37
APEX1-212ENST00000556054 ATP8B3O60423 1300 aa12.76□□□□□ -0.37
APEX1-212ENST00000556054 LCHNA4D1U4 455 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 EIF3CLB5ME19 914 aaKnown RBP12.75□□□□□ -0.37
APEX1-212ENST00000556054 O00370 1275 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 LSM8O95777 96 aaKnown RBP12.75□□□□□ -0.37
APEX1-212ENST00000556054 C1RP00736 705 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 SKILP12757 684 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 CHRNB2P17787 502 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 TNFAIP3P21580 790 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 PTPRDP23468 1912 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 CDH5P33151 784 aaPredicted RBP12.75□□□□□ -0.37
APEX1-212ENST00000556054 PBX3P40426 434 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 TSPY1Q01534 308 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 FMO1Q01740 532 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 ARID5AQ03989 594 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 SLC18A3Q16572 532 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 ZNF394Q53GI3 561 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 TDRD12Q587J7 1177 aaKnown RBP12.75□□□□□ -0.37
APEX1-212ENST00000556054 INTS6LQ5JSJ4 861 aaKnown RBP12.75□□□□□ -0.37
APEX1-212ENST00000556054 ACOT1Q86TX2 421 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 DCP1BQ8IZD4 617 aaKnown RBP12.75□□□□□ -0.37
APEX1-212ENST00000556054 OLIG1Q8TAK6 271 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 MYCBPAPQ8TBZ2 947 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 TGS1Q96RS0 853 aaKnown RBP12.75□□□□□ -0.37
APEX1-212ENST00000556054 EIF3CQ99613 913 aaKnown RBP12.75□□□□□ -0.37
APEX1-212ENST00000556054 PKMYT1Q99640 499 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 HNRNPABQ99729 332 aaKnown RBP12.75□□□□□ -0.37
APEX1-212ENST00000556054 SYT15Q9BQS2 421 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 VN1R3Q9BXE9 311 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.75□□□□□ -0.37
APEX1-212ENST00000556054 FNIP2Q9P278 1114 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 MTRRQ9UBK8 725 aa12.75□□□□□ -0.37
APEX1-212ENST00000556054 HMGXB4Q9UGU5 601 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms