RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	KCNT2	Q6UVM3	1135 aa		12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	CD300LG	Q6UXG3	332 aa		12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	ZNF280B	Q86YH2	543 aa		12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	CNGA4	Q8IV77	575 aa		12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	ARHGEF19	Q8IW93	802 aa		12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	MSLNL	Q96KJ4	702 aa		12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	KREMEN1	Q96MU8	473 aa		12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	ZNF558	Q96NG5	402 aa		12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	FAM193B	Q96PV7	902 aa	Predicted RBP	12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	PI4K2A	Q9BTU6	479 aa		12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	NIF3L1	Q9GZT8	377 aa		12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	NRDE2	Q9H7Z3	1164 aa		12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	AIPL1	Q9NZN9	384 aa		12.11	□□□□□ -0.47
RAD51B-222	ENST00000555907	KPNA7	A9QM74	516 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	PODXL	O00592	558 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	PPEF2	O14830	753 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	TACC1	O75410	805 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	CASP14	P31944	242 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	PBX3	P40426	434 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	CLCNKB	P51801	687 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	ERVFC1	P60507	584 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	APBA1	Q02410	837 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	RNASEL	Q05823	741 aa	Known RBP	12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	LRMP	Q12912	555 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	SV2C	Q496J9	727 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	SPOPL	Q6IQ16	392 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	CACNA2D4	Q7Z3S7	1137 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	BMP8A	Q7Z5Y6	402 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	FAM71A	Q8IYT1	594 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	PPM1K	Q8N3J5	372 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	UBR7	Q8N806	425 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	TC2N	Q8N9U0	490 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	SPC24	Q8NBT2	197 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	OR8K1	Q8NGG5	319 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	SPATA18	Q8TC71	538 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	SHC3	Q92529	594 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	PANX2	Q96RD6	677 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	DNAJC7	Q99615	494 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	COLEC11	Q9BWP8	271 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	TLE6	Q9H808	572 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	GOLGA2P5	Q9HBQ8	144 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	PUF60	Q9UHX1	559 aa	Known RBP	12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	FHOD1	Q9Y613	1164 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	PLXNA3	P51805	1871 aa		12.1	□□□□□ -0.47
RAD51B-222	ENST00000555907	ARHGEF37	A1IGU5	675 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	LOC730098	B7Z3J9	87 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907		M0QZQ0	153 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	FOXN3	O00409	490 aa	Predicted RBP	12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	SPTLC1	O15269	473 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	B4GALT3	O60512	393 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	GLP2R	O95838	553 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	GALT	P07902	379 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	ACO1	P21399	889 aa	Known RBP	12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	FECH	P22830	423 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	KRT9	P35527	623 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	PPM1A	P35813	382 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	STAT1	P42224	750 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	ASPA	P45381	313 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	YWHAE	P62258	255 aa	Known RBP	12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	CDK17	Q00537	523 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	PLCB3	Q01970	1234 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	KRT17	Q04695	432 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	SIGLEC14	Q08ET2	396 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	DRAP1	Q14919	205 aa	Predicted RBP	12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	PDXDC1	Q6P996	788 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	GJB7	Q6PEY0	223 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	RRAGA	Q7L523	313 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	TMEM130	Q8N3G9	435 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	TOP6BL	Q8N6T0	577 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	EFHB	Q8N7U6	833 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	SMRP1	Q8NCR6	262 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	GPR88	Q9GZN0	384 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	SPG21	Q9NZD8	308 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	LZTS1	Q9Y250	596 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	FAN1	Q9Y2M0	1017 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	TDRD15	B5MCY1	1934 aa	Known RBP	12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	TRIO	O75962	3097 aa		12.09	□□□□□ -0.47
RAD51B-222	ENST00000555907	SCN1A	P35498	2009 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	CASTOR2	A6NHX0	329 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	NT5C1B-RDH14	C9J2C7	533 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907		F8VZ95	297 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	NRP1	O14786	923 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	FSCN2	O14926	492 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	HUS1	O60921	280 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	MFAP3L	O75121	409 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	B3GAT3	O94766	335 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	EFEMP2	O95967	443 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	CYP11A1	P05108	521 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	CCDC172	P0C7W6	258 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	AVPR2	P30518	371 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	SOX5	P35711	763 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	PRKCI	P41743	596 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	ALDH7A1	P49419	539 aa	Known RBP	12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	ADK	P55263	362 aa	Known RBP	12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	BCAR1	P56945	870 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	TNNC1	P63316	161 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	INCA1	Q0VD86	236 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	MEA1	Q16626	185 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	SOWAHA	Q2M3V2	549 aa		12.08	□□□□□ -0.48
RAD51B-222	ENST00000555907	TSR1	Q2NL82	804 aa	Known RBP	12.08	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms