RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 ZFP42Q96MM3 310 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 BAG1Q99933 345 aaPredicted RBP8.34□□□□□ -1.07
PCNX4-210ENST00000555740 HTATIP2Q9BUP3 242 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 MRPL9Q9BYD2 267 aaKnown RBP8.34□□□□□ -1.07
PCNX4-210ENST00000555740 KANSL3Q9P2N6 904 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 NLRC5Q86WI3 1866 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 RBAK-RBAKDNI3L0D1 243 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 ERVH48-1M5A8F1 160 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 CST3P01034 146 aaPredicted RBP8.33□□□□□ -1.08
PCNX4-210ENST00000555740 CCDC172P0C7W6 258 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 RAG1P15918 1043 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 MPSTP25325 297 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 SCNN1GP51170 649 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 GOLGA8FQ08AF8 430 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 GOLGA8DPQ0D2H9 430 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 MYO1EQ12965 1108 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 RAPGEF1Q13905 1077 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 ASTE1Q2TB18 679 aaPredicted RBP8.33□□□□□ -1.08
PCNX4-210ENST00000555740 SV2CQ496J9 727 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 ZNF667Q5HYK9 610 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 NOMO2Q5JPE7 1267 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 CCDC170Q8IYT3 715 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 KAT5Q92993 513 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 ABHD8Q96I13 439 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 HPDLQ96IR7 371 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 CASD1Q96PB1 797 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 SPAG5Q96R06 1193 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 TMEM175Q9BSA9 504 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 PI4K2AQ9BTU6 479 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 UBE2TQ9NPD8 197 aaPredicted RBP8.33□□□□□ -1.08
PCNX4-210ENST00000555740 KLK14Q9P0G3 267 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 ZKSCAN5Q9Y2L8 839 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 VWA8A3KMH1 1905 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 TACC1O75410 805 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 TAF6P49848 677 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 GUCY2FP51841 1108 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 LRMPQ12912 555 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 IKBKEQ14164 716 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 GLRA4Q5JXX5 417 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 SCARA3Q6AZY7 606 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 SPOPLQ6IQ16 392 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 KCTD15Q96SI1 283 aaPredicted RBP8.33□□□□□ -1.08
PCNX4-210ENST00000555740 NLRC4Q9NPP4 1024 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 RAB6BQ9NRW1 208 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 ZNHIT6Q9NWK9 470 aaKnown RBP8.33□□□□□ -1.08
PCNX4-210ENST00000555740 MIOSQ9NXC5 875 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 NOCTQ9UK39 431 aaKnown RBP8.33□□□□□ -1.08
PCNX4-210ENST00000555740 AGAP1Q9UPQ3 857 aa8.33□□□□□ -1.08
PCNX4-210ENST00000555740 ESPNB1AK53 854 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 PPEF2O14830 753 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 WDR5P61964 334 aaKnown RBP8.32□□□□□ -1.08
PCNX4-210ENST00000555740 USP4Q13107 963 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 UPP1Q16831 310 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 INTS6LQ5JSJ4 861 aaKnown RBP8.32□□□□□ -1.08
PCNX4-210ENST00000555740 PSRC1Q6PGN9 363 aaPredicted RBP8.32□□□□□ -1.08
PCNX4-210ENST00000555740 CD300LGQ6UXG3 332 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 ZNF677Q86XU0 584 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 COLGALT2Q8IYK4 626 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 LRRC43Q8N309 656 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 PPM1KQ8N3J5 372 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 TOP6BLQ8N6T0 577 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 SCG3Q8WXD2 468 aaKnown RBP8.32□□□□□ -1.08
PCNX4-210ENST00000555740 ARHGAP20Q9P2F6 1191 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 COL4A4P53420 1690 aaPredicted RBP8.32□□□□□ -1.08
PCNX4-210ENST00000555740 PODXLO00592 558 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 CILPO75339 1184 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 AMHP03971 560 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 PAEPP09466 180 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 CSF2RAP15509 400 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 WARSP23381 471 aaKnown RBP8.32□□□□□ -1.08
PCNX4-210ENST00000555740 BPIFB4P59827 614 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 FPGSQ05932 587 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 DPH6Q7L8W6 267 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 CMTR2Q8IYT2 770 aaKnown RBP8.32□□□□□ -1.08
PCNX4-210ENST00000555740 CPLX3Q8WVH0 158 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 ZNF689Q96CS4 500 aaPredicted RBP8.32□□□□□ -1.08
PCNX4-210ENST00000555740 ASB16Q96NS5 453 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 SDCBP2Q9H190 292 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 CYLDQ9NQC7 956 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 PRDM5Q9NQX1 630 aaPredicted RBP8.32□□□□□ -1.08
PCNX4-210ENST00000555740 TBC1D13Q9NVG8 400 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 PCDHB7Q9Y5E2 793 aa8.32□□□□□ -1.08
PCNX4-210ENST00000555740 GBF1Q92538 1859 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 EIF3CLB5ME19 914 aaKnown RBP8.31□□□□□ -1.08
PCNX4-210ENST00000555740 M0QZQ0 153 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 FOXN3O00409 490 aaPredicted RBP8.31□□□□□ -1.08
PCNX4-210ENST00000555740 EFEMP2O95967 443 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 CYP11A1P05108 521 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 SKILP12757 684 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 AFF1P51825 1210 aaKnown RBP8.31□□□□□ -1.08
PCNX4-210ENST00000555740 TNNC1P63316 161 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 SKOR1P84550 965 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 RASIP1Q5U651 963 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 RAD9BQ6WBX8 426 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 ZNF662Q6ZS27 426 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 TMC7Q7Z402 723 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 DEFB128Q7Z7B8 93 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 UNC93AQ86WB7 457 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 ATCAYQ86WG3 371 aa8.31□□□□□ -1.08
PCNX4-210ENST00000555740 TRIM44Q96DX7 344 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms