RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 WNT10BO00744 389 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 GRM6O15303 877 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 AHSGP02765 367 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 GNAI3P08754 354 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 MTHFD1P11586 935 aaKnown RBP6.54□□□□□ -1.36
VRK1-205ENST00000555402 ATP5JP18859 108 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 KCNJ5P48544 419 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 SUMO3P55854 103 aaPredicted RBP6.54□□□□□ -1.36
VRK1-205ENST00000555402 GNAI1P63096 354 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 GUCY1B3Q02153 619 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 CHAF1AQ13111 956 aaPredicted RBP6.54□□□□□ -1.36
VRK1-205ENST00000555402 STK3Q13188 491 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 MRPL49Q13405 166 aaKnown RBP6.54□□□□□ -1.36
VRK1-205ENST00000555402 CNGA2Q16280 664 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 GRAMD1BQ3KR37 738 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 PABPC1LQ4VXU2 614 aaKnown RBP6.54□□□□□ -1.36
VRK1-205ENST00000555402 DOK3Q7L591 496 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 DPP9Q86TI2 863 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 ANKS1AQ92625 1134 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 RIPOR3Q96MK2 946 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 MYOCQ99972 504 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 MRI1Q9BV20 369 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.54□□□□□ -1.36
VRK1-205ENST00000555402 ATRNL1Q5VV63 1379 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 TCRBV7S2A1N4TA0A589 114 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 ISM1B1AKI9 464 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 RASA4BC9J798 803 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 RASA4O43374 803 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 NPR1P16066 1061 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 PHKA1P46020 1223 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 PIK3CGP48736 1102 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 SOX8P57073 446 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 EXOSC9Q06265 439 aaKnown RBP6.53□□□□□ -1.36
VRK1-205ENST00000555402 ZRSR2Q15696 482 aaKnown RBP6.53□□□□□ -1.36
VRK1-205ENST00000555402 FAM90A1Q86YD7 464 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 CPEB3Q8NE35 698 aaKnown RBP6.53□□□□□ -1.36
VRK1-205ENST00000555402 SUCLG2Q96I99 432 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 SGCZQ96LD1 299 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 PPCSQ9HAB8 311 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 ARFGAP3Q9NP61 516 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 PNPLA8Q9NP80 782 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 SIDT1Q9NXL6 827 aaKnown RBP6.53□□□□□ -1.36
VRK1-205ENST00000555402 CPNE7Q9UBL6 633 aa6.53□□□□□ -1.36
VRK1-205ENST00000555402 COL3A1P02461 1466 aaPredicted RBP6.53□□□□□ -1.36
VRK1-205ENST00000555402 UNC119BA6NIH7 251 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 F5H423 210 aaPredicted RBP6.52□□□□□ -1.37
VRK1-205ENST00000555402 FOXN3O00409 490 aaPredicted RBP6.52□□□□□ -1.37
VRK1-205ENST00000555402 FOSP01100 380 aaPredicted RBP6.52□□□□□ -1.37
VRK1-205ENST00000555402 SNRPA1P09661 255 aaKnown RBP6.52□□□□□ -1.37
VRK1-205ENST00000555402 SBK3P0C264 359 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 HDCP19113 662 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 TNFSF4P23510 183 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 STT3AP46977 705 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 CASP5P51878 434 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 RNASE9P60153 205 aaKnown RBP6.52□□□□□ -1.37
VRK1-205ENST00000555402 RAP2BP61225 183 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 NOMO3P69849 1222 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 FMO1Q01740 532 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 BTKQ06187 659 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 FOXF2Q12947 444 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 DHX8Q14562 1220 aaKnown RBP6.52□□□□□ -1.37
VRK1-205ENST00000555402 CCDC93Q567U6 631 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 ABHD17BQ5VST6 288 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 OTUD7BQ6GQQ9 843 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 ZNF529Q6P280 563 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 MYLK4Q86YV6 388 aaPredicted RBP6.52□□□□□ -1.37
VRK1-205ENST00000555402 CCDC33Q8N5R6 958 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 OR2C3Q8N628 320 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 PCSK9Q8NBP7 692 aaKnown RBP6.52□□□□□ -1.37
VRK1-205ENST00000555402 CAGE1Q8TC20 777 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 P2RX7Q99572 595 aaKnown RBP6.52□□□□□ -1.37
VRK1-205ENST00000555402 PACSIN1Q9BY11 444 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 TEX101Q9BY14 249 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 BRD9Q9H8M2 597 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 PTPRHQ9HD43 1115 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 SACM1LQ9NTJ5 587 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 RNF7Q9UBF6 113 aa6.52□□□□□ -1.37
VRK1-205ENST00000555402 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.52□□□□□ -1.37
VRK1-205ENST00000555402 ABHD14A-ACY1A0A1B0GW23 586 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 POM121BA6NF01 834 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 CXorf49A8MYA2 514 aaPredicted RBP6.51□□□□□ -1.37
VRK1-205ENST00000555402 DIRC3C9JPN6 131 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 MYO1FO00160 1098 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 TBX3O15119 743 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 ESRRBO95718 433 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 TRAPPC10P48553 1259 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 BLOC1S1P78537 153 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 FAM209BQ5JX69 171 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 DACT2Q5SW24 774 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 SEM1Q6ZVN7 128 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 UBE3BQ7Z3V4 1068 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 XYLT1Q86Y38 959 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 LIX1LQ8IVB5 337 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 SRRM1Q8IYB3 904 aaKnown RBP6.51□□□□□ -1.37
VRK1-205ENST00000555402 AOPEPQ8N6M6 819 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 IL17RDQ8NFM7 739 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 NLGN4YQ8NFZ3 816 aaPredicted RBP6.51□□□□□ -1.37
VRK1-205ENST00000555402 OR6B3Q8NGW1 331 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 DEPTORQ8TB45 409 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 SLC35B2Q8TB61 432 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms