RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 ST13P5Q8NFI4 369 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 DNERQ8NFT8 737 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 MAP4K1Q92918 833 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 BBC3Q96PG8 261 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 SPON2Q9BUD6 331 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 SCNM1Q9BWG6 230 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 RWDD1Q9H446 243 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 RNPEPQ9H4A4 650 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 TYW1Q9NV66 732 aaKnown RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 LZTS1Q9Y250 596 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 MTF2Q9Y483 593 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 PCDHB7Q9Y5E2 793 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 SLC4A4Q9Y6R1 1079 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 DSPP15924 2871 aaKnown RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 FRMPD2Q68DX3 1309 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-226ENST00000554350 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-226ENST00000554350 C2orf71A6NGG8 1288 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 BUB1BO60566 1050 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-226ENST00000554350 PPFIA4O75335 1185 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 PRDM1O75626 825 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 CXCL14O95715 111 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 PRB1P04280 392 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 LIMK1P53667 647 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 ZNF445P59923 1031 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 HDAC1Q13547 482 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-226ENST00000554350 TTF1Q15361 905 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-226ENST00000554350 STXBP2Q15833 593 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 LETM2Q2VYF4 491 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 AXDND1Q5T1B0 1012 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-226ENST00000554350 CTR9Q6PD62 1173 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 LINC01356Q8N9X3 169 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 GLG1Q92896 1179 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 FAM126AQ9BYI3 521 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-226ENST00000554350 SFXN1Q9H9B4 322 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 MTMR4Q9NYA4 1195 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 DBNLQ9UJU6 430 aaKnown RBP6.51□□□□□ -1.37
ATXN3-226ENST00000554350 DDX19BQ9UMR2 479 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 NBEAQ8NFP9 2946 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 BPTFQ12830 3046 aa6.51□□□□□ -1.37
ATXN3-226ENST00000554350 PATJQ8NI35 1801 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 FFAR3O14843 346 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 FGF10O15520 208 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-226ENST00000554350 GNAI3P08754 354 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 GSTM1P09488 218 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 CD72P21854 359 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 SLC16A2P36021 539 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 PBX3P40426 434 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 MAGEA9P43362 315 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 MAPKAPK2P49137 400 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 STARD6P59095 220 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 PPP2R5DQ14738 602 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 HSDL1Q3SXM5 330 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 ANKRD39Q53RE8 183 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 FBXO47Q5MNV8 452 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 ZBTB41Q5SVQ8 909 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 RCSD1Q6JBY9 416 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 CEP68Q76N32 757 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 GPR149Q86SP6 731 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 RTN4RL1Q86UN2 441 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-226ENST00000554350 MRPL43Q8N983 215 aaKnown RBP6.5□□□□□ -1.37
ATXN3-226ENST00000554350 SSH1Q8WYL5 1049 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 STAMQ92783 540 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 MKL1Q969V6 931 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 LRIG1Q96JA1 1093 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 DHRS1Q96LJ7 313 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 PWWP2AQ96N64 755 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 ZNF558Q96NG5 402 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 DNAJC2Q99543 621 aaKnown RBP6.5□□□□□ -1.37
ATXN3-226ENST00000554350 C16orf70Q9BSU1 422 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 LSM14BQ9BX40 385 aaKnown RBP6.5□□□□□ -1.37
ATXN3-226ENST00000554350 FTHL17Q9BXU8 183 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 BCL11AQ9H165 835 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 MLXIPQ9HAP2 919 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 LUC7LQ9NQ29 371 aaKnown RBP6.5□□□□□ -1.37
ATXN3-226ENST00000554350 ARPP21Q9UBL0 812 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-226ENST00000554350 DDX41Q9UJV9 622 aaKnown RBP6.5□□□□□ -1.37
ATXN3-226ENST00000554350 CDY2AQ9Y6F7 541 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 USP9XQ93008 2570 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-226ENST00000554350 CCDC171Q6TFL3 1326 aa6.5□□□□□ -1.37
ATXN3-226ENST00000554350 DENND4AQ7Z401 1863 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 MYO18BQ8IUG5 2567 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 GREB1LQ9C091 1923 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-226ENST00000554350 IGKV6D-41A0A0C4DH26 115 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 PNMA6EA0A0J9YXQ4 647 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 GOLIM4O00461 696 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 NOP56O00567 594 aaKnown RBP6.49□□□□□ -1.37
ATXN3-226ENST00000554350 NCAM2O15394 837 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 ARHGAP6O43182 974 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 N4BP1O75113 896 aaKnown RBP6.49□□□□□ -1.37
ATXN3-226ENST00000554350 GGPS1O95749 300 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 IGHDP01880 384 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 LGALS2P05162 132 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 TSPY3P0CV98 308 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 TSPY8P0CW00 308 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 PLA2G2AP14555 144 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 PPM1AP35813 382 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 ATP8B2P98198 1209 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 NFKB2Q00653 900 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 TMEM62Q0P6H9 643 aa6.49□□□□□ -1.37
ATXN3-226ENST00000554350 PAK2Q13177 524 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms