RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 EXOC8Q8IYI6 725 aa12.91□□□□□ -0.34
LRP1-207ENST00000554174 KIAA0319LQ8IZA0 1049 aa12.91□□□□□ -0.34
LRP1-207ENST00000554174 ARFGAP1Q8N6T3 406 aa12.91□□□□□ -0.34
LRP1-207ENST00000554174 JOSD2Q8TAC2 188 aa12.91□□□□□ -0.34
LRP1-207ENST00000554174 CXorf38Q8TB03 319 aa12.91□□□□□ -0.34
LRP1-207ENST00000554174 HAUS1Q96CS2 278 aa12.91□□□□□ -0.34
LRP1-207ENST00000554174 CPB2Q96IY4 423 aa12.91□□□□□ -0.34
LRP1-207ENST00000554174 ZNF317Q96PQ6 595 aaPredicted RBP12.91□□□□□ -0.34
LRP1-207ENST00000554174 SMYD3Q9H7B4 428 aa12.91□□□□□ -0.34
LRP1-207ENST00000554174 RPF1Q9H9Y2 349 aaKnown RBP12.91□□□□□ -0.34
LRP1-207ENST00000554174 HOMER3Q9NSC5 361 aa12.91□□□□□ -0.34
LRP1-207ENST00000554174 NINJ2Q9NZG7 142 aa12.91□□□□□ -0.34
LRP1-207ENST00000554174 TNFSF13BQ9Y275 285 aa12.91□□□□□ -0.34
LRP1-207ENST00000554174 A0A087WZ62 844 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 STAG3L1P0CL83 205 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 DRD4P21917 467 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 OSBPP22059 807 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 SLC26A2P50443 739 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 LACTBP83111 547 aaPredicted RBP12.9□□□□□ -0.34
LRP1-207ENST00000554174 TTLL4Q14679 1199 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 AMHR2Q16671 573 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 SMTNL2Q2TAL5 461 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 P3H1Q32P28 736 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 JADE1Q6IE81 842 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 SPOCD1Q6ZMY3 1216 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 GSTA5Q7RTV2 222 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 PACS2Q86VP3 889 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 C3orf20Q8ND61 904 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 IPO4Q8TEX9 1081 aaKnown RBP12.9□□□□□ -0.34
LRP1-207ENST00000554174 CENPTQ96BT3 561 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 FDXACB1Q9BRP7 624 aaPredicted RBP12.9□□□□□ -0.34
LRP1-207ENST00000554174 ZNF518BQ9C0D4 1074 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 MROH8Q9H579 483 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 ERAP1Q9NZ08 941 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 C5orf60A6NFR6 353 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 VTNP04004 478 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 ITGB3P05106 788 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 LGALS2P05162 132 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 ZNF286BP0CG31 522 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 CETPP11597 493 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 HIBCHQ6NVY1 386 aaPredicted RBP12.9□□□□□ -0.34
LRP1-207ENST00000554174 TAPT1Q6NXT6 567 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 MAMDC4Q6UXC1 1216 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 CCDC89Q8N998 374 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 RBM41Q96IZ5 413 aaKnown RBP12.9□□□□□ -0.34
LRP1-207ENST00000554174 SEC16BQ96JE7 1060 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 C9orf72Q96LT7 481 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 CPXM1Q96SM3 734 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 PRMT1Q99873 361 aaKnown RBP12.9□□□□□ -0.34
LRP1-207ENST00000554174 BCO2Q9BYV7 579 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 ROPN1BQ9BZX4 212 aaPredicted RBP12.9□□□□□ -0.34
LRP1-207ENST00000554174 TSPYL1Q9H0U9 437 aa12.9□□□□□ -0.34
LRP1-207ENST00000554174 ROPN1Q9HAT0 212 aaPredicted RBP12.9□□□□□ -0.34
LRP1-207ENST00000554174 SAE1Q9UBE0 346 aaPredicted RBP12.9□□□□□ -0.34
LRP1-207ENST00000554174 hCG_1818297A0A087WSY0 165 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 LRRD1A4D1F6 860 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 C3orf70A6NLC5 250 aaPredicted RBP12.89□□□□□ -0.35
LRP1-207ENST00000554174 IL1R2P27930 398 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 CDKN2BP42772 138 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 SF3A3Q12874 501 aaKnown RBP eCLIP12.89□□□□□ -0.35
LRP1-207ENST00000554174 PIGHQ14442 188 aaPredicted RBP12.89□□□□□ -0.35
LRP1-207ENST00000554174 SPRED3Q2MJR0 410 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 ZNF667Q5HYK9 610 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 KCNT1Q5JUK3 1230 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 LRRC38Q5VT99 294 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 FASTKD5Q7L8L6 764 aaKnown RBP12.89□□□□□ -0.35
LRP1-207ENST00000554174 CYP4X1Q8N118 509 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 MICALL1Q8N3F8 863 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 OTUD6BQ8N6M0 293 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 EMC1Q8N766 993 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 SLC4A11Q8NBS3 891 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 PPM1EQ8WY54 764 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 CHMP6Q96FZ7 201 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 ELOVL4Q9GZR5 314 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 PDZD7Q9H5P4 517 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 ZNF148Q9UQR1 794 aa12.89□□□□□ -0.35
LRP1-207ENST00000554174 ATXN2Q99700 1313 aaKnown RBP12.89□□□□□ -0.35
LRP1-207ENST00000554174 TJP3O95049 919 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 ERBB2P04626 1255 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 SLC25A11Q02978 314 aaKnown RBP12.88□□□□□ -0.35
LRP1-207ENST00000554174 CAV1Q03135 178 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 CNGA2Q16280 664 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 TFDP3Q5H9I0 405 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 SPATS2Q86XZ4 545 aaKnown RBP12.88□□□□□ -0.35
LRP1-207ENST00000554174 LINC01465Q8N7H1 131 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 NIPA2Q8N8Q9 360 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 KAT2BQ92831 832 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 TMEM121Q9BTD3 319 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 C10orf88Q9H8K7 445 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 ZWILCHQ9H900 591 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 INTS9Q9NV88 658 aaKnown RBP12.88□□□□□ -0.35
LRP1-207ENST00000554174 ASAP2O43150 1006 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 LRCH4O75427 683 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 KIAA0754O94854 1291 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 IL18RAPO95256 599 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 KRT3P12035 628 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 YBX3P16989 372 aaKnown RBP eCLIP12.88□□□□□ -0.351e-10■□□□□ 8.9
LRP1-207ENST00000554174 ARF4P18085 180 aaPredicted RBP12.88□□□□□ -0.35
LRP1-207ENST00000554174 PSMA2P25787 234 aa12.88□□□□□ -0.35
LRP1-207ENST00000554174 IFNAR2P48551 515 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms