RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 NFIAQ12857 509 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 DHX34Q14147 1143 aaKnown RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 PLS1Q14651 629 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 KIF22Q14807 665 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 DRAP1Q14919 205 aaPredicted RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 PLCB4Q15147 1175 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 LRCH2Q5VUJ6 765 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 NAA35Q5VZE5 725 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 ICE2Q659A1 982 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 KCTD16Q68DU8 428 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 KIAA1211LQ6NV74 962 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 HOOK3Q86VS8 718 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 ZFPM1Q8IX07 1006 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 RHOT2Q8IXI1 618 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 C12orf56Q8IXR9 622 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 LILRB2Q8N423 598 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 TMEM151AQ8N4L1 468 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 SH2D3CQ8N5H7 860 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 BEND7Q8N7W2 519 aaPredicted RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 LNX1Q8TBB1 728 aaPredicted RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 SLC35G2Q8TBE7 412 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 THAP3Q8WTV1 239 aaPredicted RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 CHURC1Q8WUH1 139 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 CYB5D2Q8WUJ1 264 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 ISL2Q96A47 359 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 MASTLQ96GX5 879 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 RPS6KC1Q96S38 1066 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 CEP89Q96ST8 783 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 SYT11Q9BT88 431 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 YIPF2Q9BWQ6 316 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 STRA6Q9BX79 667 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 INTS2Q9H0H0 1204 aaKnown RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 PLEKHA4Q9H4M7 779 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 TMEM206Q9H813 350 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 DNAJC18Q9H819 358 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 AKTIPQ9H8T0 292 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 FBRSQ9HAH7 460 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 HERC5Q9UII4 1024 aaKnown RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 RASAL2Q9UJF2 1139 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 PCOLCE2Q9UKZ9 415 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 ZNF214Q9UL59 606 aaPredicted RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 MRPL11Q9Y3B7 192 aaKnown RBP6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 ACTL7BQ9Y614 415 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 ATRNL1Q5VV63 1379 aa6.43□□□□□ -1.38
CHMP4A-210ENST00000552620 COL2A1P02458 1487 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 KIF13BQ9NQT8 1826 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 ARFGEF1Q9Y6D6 1849 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 IGLV3-22A0A075B6J6 115 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 C5orf60A6NFR6 353 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 DDTLA6NHG4 134 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 RSPH10B2B2RC85 870 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 AGRPO00253 132 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 DAPK3O43293 454 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 TRAPPC3O43617 180 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 BUB1BO60566 1050 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 CLEC3AO75596 197 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 LRIG2O94898 1065 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 RSPH10BP0C881 870 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 GUCY1A3Q02108 690 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 ZNF844Q08AG5 666 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 IKQ13123 557 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 SLBPQ14493 270 aaKnown RBP eCLIP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 UAP1Q16222 522 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 NKG7Q16617 165 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 C2orf27AQ580R0 203 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 PLEKHG4Q58EX7 1191 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 ODF2Q5BJF6 829 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 DACT2Q5SW24 774 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 RNF187Q5TA31 235 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 PRAMEF13Q5VWM6 474 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 DUPD1Q68J44 220 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 MRM1Q6IN84 353 aaKnown RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 C11orf63Q6NUN7 778 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 C6orf89Q6UWU4 347 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 INTS8Q75QN2 995 aaKnown RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 FAM160B2Q86V87 743 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 TPH2Q8IWU9 490 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 AGGF1Q8N302 714 aaeCLIP6.42□□□□□ -1.382e-8■□□□□ 9
CHMP4A-210ENST00000552620 SAMD3Q8N6K7 520 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 UBL4BQ8N7F7 174 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 MFSD2AQ8NA29 543 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 C2CD4AQ8NCU7 369 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 SLC17A8Q8NDX2 589 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 FLAD1Q8NFF5 587 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 MYCBPAPQ8TBZ2 947 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 UBLCP1Q8WVY7 318 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 DYDC2Q96IM9 177 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 SLC6A18Q96N87 628 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 IWS1Q96ST2 819 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 P2RX7Q99572 595 aaKnown RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 RIT2Q99578 217 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 AGPAT1Q99943 283 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 DPH2Q9BQC3 489 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 ERP44Q9BS26 406 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 TIPINQ9BVW5 301 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 TEKT3Q9BXF9 490 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 AP1M1Q9BXS5 423 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms