RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 DOCK5Q9H7D0 1870 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 CLRN2A0PK11 232 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 E7ENQ6 273 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 TRAFD1O14545 582 aaPredicted RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 TLR3O15455 904 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ENTPD3O75355 529 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 LUC7L3O95232 432 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 VNN1O95497 513 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 PDHA1P08559 390 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 NPR1P16066 1061 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ATF7P17544 494 aaPredicted RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 SLC18A1P54219 525 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 INHBEP58166 350 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 IRX1P78414 480 aaPredicted RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 OGDHQ02218 1023 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 NFX1Q12986 1120 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 KHDC1Q4VXA5 237 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 RNASEH2BQ5TBB1 312 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ANKRD22Q5VYY1 191 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 TDRD10Q5VZ19 366 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ZBED8Q8IZ13 594 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 LARGE2Q8N3Y3 721 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ALLCQ8N6M5 410 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ARMC2Q8NEN0 867 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 EXD1Q8NHP7 514 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 MASTLQ96GX5 879 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 CFAP57Q96MR6 1250 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 SLITRK1Q96PX8 696 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 KLF6Q99612 283 aaPredicted RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 SYT15Q9BQS2 421 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 CADM1Q9BY67 442 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 VPS37BQ9H9H4 285 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ALG13Q9NP73 1137 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ZFATQ9P243 1243 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 SAE1Q9UBE0 346 aaPredicted RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 PCDHB2Q9Y5E7 798 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 IVNS1ABPQ9Y6Y0 642 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 UTRNP46939 3433 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 C2orf71A6NGG8 1288 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 SIGLEC16A6NMB1 481 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 F8VP50 259 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 GOLGA8RI6L899 631 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 ALOX15BO15296 676 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 ZNF862O60290 1169 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 DCTN3O75935 186 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 HLA-DRAP01903 254 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 C4BPAP04003 597 aaKnown RBP5.71□□□□□ -1.49
LIMA1-212ENST00000552491 KRT4P19013 534 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 EIF2AK2P19525 551 aaKnown RBP5.71□□□□□ -1.49
LIMA1-212ENST00000552491 ALDH3A1P30838 453 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 SSTR1P30872 391 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 PDIA2Q13087 525 aaKnown RBP5.71□□□□□ -1.49
LIMA1-212ENST00000552491 MTMR1Q13613 665 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 TFDP1Q14186 410 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 OASLQ15646 514 aaKnown RBP5.71□□□□□ -1.49
LIMA1-212ENST00000552491 ZBTB41Q5SVQ8 909 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 THEMIS2Q5TEJ8 643 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 CC2D2BQ6DHV5 1058 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 PLEKHA7Q6IQ23 1121 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 CLNKQ7Z7G1 428 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 C4orf19Q8IY42 314 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 TAB3Q8N5C8 712 aaPredicted RBP5.71□□□□□ -1.49
LIMA1-212ENST00000552491 TEX9Q8N6V9 391 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 LRRC8CQ8TDW0 803 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 MZB1Q8WU39 189 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 CHURC1Q8WUH1 139 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 UCMAQ8WVF2 138 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 NRG4Q8WWG1 115 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 TAAR1Q96RJ0 339 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 SMC6Q96SB8 1091 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 TMEM121Q9BTD3 319 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 HAPLN2Q9GZV7 340 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 DEFB129Q9H1M3 183 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 TLE6Q9H808 572 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 PIDD1Q9HB75 910 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 KMT5AQ9NQR1 393 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 HOMER2Q9NSB8 354 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 ARL8BQ9NVJ2 186 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 SLC17A7Q9P2U7 560 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 RGS17Q9UGC6 210 aaPredicted RBP5.71□□□□□ -1.49
LIMA1-212ENST00000552491 DCTN4Q9UJW0 460 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 USP21Q9UK80 565 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 CCPG1Q9ULG6 757 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 ZNF148Q9UQR1 794 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 ZNF541Q9H0D2 1346 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 RGPD3A6NKT7 1758 aaPredicted RBP5.71□□□□□ -1.49
LIMA1-212ENST00000552491 RGPD4Q7Z3J3 1758 aa5.71□□□□□ -1.49
LIMA1-212ENST00000552491 NFASCO94856 1347 aa5.71□□□□□ -1.5
LIMA1-212ENST00000552491 TCRBV7S3A2A0A539 114 aa5.71□□□□□ -1.5
LIMA1-212ENST00000552491 SOWAHBA6NEL2 793 aa5.71□□□□□ -1.5
LIMA1-212ENST00000552491 YDJCA8MPS7 323 aa5.71□□□□□ -1.5
LIMA1-212ENST00000552491 C2CD2LO14523 706 aa5.71□□□□□ -1.5
LIMA1-212ENST00000552491 HNRNPDLO14979 420 aaKnown RBP5.71□□□□□ -1.5
LIMA1-212ENST00000552491 ATP4AP20648 1035 aa5.71□□□□□ -1.5
LIMA1-212ENST00000552491 ATP6V1C1P21283 382 aa5.71□□□□□ -1.5
LIMA1-212ENST00000552491 GLRA2P23416 452 aa5.71□□□□□ -1.5
LIMA1-212ENST00000552491 GTF2H1P32780 548 aa5.71□□□□□ -1.5
LIMA1-212ENST00000552491 CAP2P40123 477 aa5.71□□□□□ -1.5
LIMA1-212ENST00000552491 PIK3CAP42336 1068 aa5.71□□□□□ -1.5
LIMA1-212ENST00000552491 ACOT2P49753 483 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms