RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 C4orf33Q8N1A6 199 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 TAB3Q8N5C8 712 aaPredicted RBP13.75□□□□□ -0.21
CACNB3-219ENST00000551544 TMEM35BQ8NCS4 154 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 CCHCR1Q8TD31 782 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 KLHL29Q96CT2 875 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 C10orf88Q9H8K7 445 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 CISHQ9NSE2 258 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 PIM2Q9P1W9 311 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 ADCY3O60266 1144 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 ABHD2P08910 425 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 SRGAP2CP0DJJ0 459 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 BNIP1Q12981 228 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 MKRN3Q13064 507 aaKnown RBP13.75□□□□□ -0.21
CACNB3-219ENST00000551544 PRKG1Q13976 671 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 PKN2Q16513 984 aaKnown RBP13.75□□□□□ -0.21
CACNB3-219ENST00000551544 PPP1R2P3Q6NXS1 205 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 CEP128Q6ZU80 1094 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 TRABD2AQ86V40 505 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 BRSK2Q8IWQ3 736 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 PRPF31Q8WWY3 499 aaKnown RBP13.75□□□□□ -0.21
CACNB3-219ENST00000551544 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 FOXP3Q9BZS1 431 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 TRABDQ9H4I3 376 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 TRIM33Q9UPN9 1127 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 ACTL7BQ9Y614 415 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 hCG_1818297A0A087WSY0 165 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 SPDYE16A6NNV3 312 aaPredicted RBP13.74□□□□□ -0.21
CACNB3-219ENST00000551544 ATG7O95352 703 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 VCPP55072 806 aaKnown RBP13.74□□□□□ -0.21
CACNB3-219ENST00000551544 SLC8A3P57103 927 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 TFAMQ00059 246 aaKnown RBP13.74□□□□□ -0.21
CACNB3-219ENST00000551544 MGAT5Q09328 741 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 PDIA2Q13087 525 aaKnown RBP13.74□□□□□ -0.21
CACNB3-219ENST00000551544 DNAJC3Q13217 504 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 MTFR1Q15390 333 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 SMTNL2Q2TAL5 461 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 TFDP3Q5H9I0 405 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 ERICH1Q86X53 443 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 ANKMY2Q8IV38 441 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 GBP7Q8N8V2 638 aaPredicted RBP13.74□□□□□ -0.21
CACNB3-219ENST00000551544 TFAP2BQ92481 460 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 ZNF668Q96K58 619 aaPredicted RBP13.74□□□□□ -0.21
CACNB3-219ENST00000551544 ZWILCHQ9H900 591 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 EBF2Q9HAK2 575 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 RXFP1Q9HBX9 757 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 PRKAG3Q9UGI9 489 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 STK38LQ9Y2H1 464 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 UBA1P22314 1058 aaKnown RBP13.74□□□□□ -0.21
CACNB3-219ENST00000551544 ALDH5A1P51649 535 aaPredicted RBP13.74□□□□□ -0.21
CACNB3-219ENST00000551544 MCL1Q07820 350 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 TRPC3Q13507 836 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 WDR72Q3MJ13 1102 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 EEPD1Q7L9B9 569 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 RIBC1Q8N443 379 aaPredicted RBP13.74□□□□□ -0.21
CACNB3-219ENST00000551544 WDTC1Q8N5D0 677 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 UBR7Q8N806 425 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 TTC25Q96NG3 672 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 PCYT2Q99447 389 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 PLCD4Q9BRC7 762 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 NIFKQ9BYG3 293 aaKnown RBP13.74□□□□□ -0.21
CACNB3-219ENST00000551544 NIF3L1Q9GZT8 377 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 TMEM134Q9H6X4 195 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 NRBP2Q9NSY0 501 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 AGTPBP1Q9UPW5 1226 aa13.74□□□□□ -0.21
CACNB3-219ENST00000551544 C19orf81C9J6K1 198 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 MARK3P27448 753 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 OSTNP61366 133 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 MTM1Q13496 603 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 KCNT1Q5JUK3 1230 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 ECHDC2Q86YB7 292 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 WDR49Q8IV35 697 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 C12orf42Q96LP6 360 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 TCRBV5S1A1TA0A578 114 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 ATP2A1O14983 1001 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 PIAS1O75925 651 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 LSM8O95777 96 aaKnown RBP13.73□□□□□ -0.21
CACNB3-219ENST00000551544 CD19P15391 556 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 CDKN2BP42772 138 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 STAT5BP51692 787 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 CLNS1AP54105 237 aaKnown RBP13.73□□□□□ -0.21
CACNB3-219ENST00000551544 PIGHQ14442 188 aaPredicted RBP13.73□□□□□ -0.21
CACNB3-219ENST00000551544 MORF4L2Q15014 288 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 OASLQ15646 514 aaKnown RBP13.73□□□□□ -0.21
CACNB3-219ENST00000551544 RNASEH2BQ5TBB1 312 aaKnown RBP13.73□□□□□ -0.21
CACNB3-219ENST00000551544 LRRC38Q5VT99 294 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 ANGEL2Q5VTE6 544 aaKnown RBP13.73□□□□□ -0.21
CACNB3-219ENST00000551544 DRICH1Q6PGQ1 229 aaPredicted RBP13.73□□□□□ -0.21
CACNB3-219ENST00000551544 MAB21L3Q8N8X9 362 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 SMC6Q96SB8 1091 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 HOXC10Q9NYD6 342 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 NXF1Q9UBU9 619 aaKnown RBP13.73□□□□□ -0.21
CACNB3-219ENST00000551544 DRG1Q9Y295 367 aaKnown RBP13.73□□□□□ -0.21
CACNB3-219ENST00000551544 PHIPQ8WWQ0 1821 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 UTRNP46939 3433 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 PARP14Q460N5 1801 aa13.73□□□□□ -0.21
CACNB3-219ENST00000551544 RPS12P25398 132 aaKnown RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 PSMA2P25787 234 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 RFC5P40937 340 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 GAD2Q05329 585 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 DUOXA2Q1HG44 320 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms