RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 DGKIO75912 1065 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 OR6B1O95007 311 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 DEXIO95424 95 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 IL1BP01584 269 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ZFYP08048 801 aaPredicted RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ANPEPP15144 967 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 CREB1P16220 341 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 TRIM21P19474 475 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 TRAPPC10P48553 1259 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ARPC4P59998 168 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 GFPT1Q06210 699 aaPredicted RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 PPIDQ08752 370 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 CDC16Q13042 620 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 SLC39A6Q13433 755 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 TRIM29Q14134 588 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 DHX34Q14147 1143 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 TCEAL1Q15170 157 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 NONOQ15233 471 aaKnown RBP eCLIP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 HLFQ16534 295 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 CCDC142Q17RM4 750 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 PRRT3Q5FWE3 981 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 EARS2Q5JPH6 523 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 UBAP2Q5T6F2 1119 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 LDLRAD1Q5T700 205 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ARL6IP4Q66PJ3 421 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 SNRNP48Q6IEG0 339 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 AAGABQ6PD74 315 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 KLHDC10Q6PID8 442 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 CCDC174Q6PII3 467 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 C1orf228Q6PIY5 440 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 RHBDF2Q6PJF5 856 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ATG9AQ7Z3C6 839 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 NANOGNBQ7Z5D8 188 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 PATL1Q86TB9 770 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 CCDC84Q86UT8 332 aaPredicted RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ZC3H18Q86VM9 953 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 PALB2Q86YC2 1186 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 RELL1Q8IUW5 271 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 TBC1D10CQ8IV04 446 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 MAP7D3Q8IWC1 876 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 LSMEM2Q8N112 164 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 MARVELD2Q8N4S9 558 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ANKRD13CQ8N6S4 541 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 MIGA1Q8NAN2 632 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 PPFIBP2Q8ND30 876 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 PYROXD1Q8WU10 500 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ART4Q93070 314 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 PHKBQ93100 1093 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ERP27Q96DN0 273 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 SGF29Q96ES7 293 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 COX4I2Q96KJ9 171 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 CNOT6LQ96LI5 555 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 RUNDC3BQ96NL0 473 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 BTBD9Q96Q07 612 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 FNBP1Q96RU3 617 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 TRIM56Q9BRZ2 755 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 BTBD10Q9BSF8 475 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 PHF20Q9BVI0 1012 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 MAK16Q9BXY0 300 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 RTFDC1Q9BY42 306 aaPredicted RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 SENP6Q9GZR1 1112 aaPredicted RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 BLZF1Q9H2G9 400 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 SEMA4AQ9H3S1 761 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 TPK1Q9H3S4 243 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ZNF696Q9H7X3 374 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ARHGEF4Q9NR80 690 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 C9orf78Q9NZ63 289 aaPredicted RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 MAGEC2Q9UBF1 373 aaPredicted RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ANGPTL2Q9UKU9 493 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 CDH7Q9ULB5 785 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 PPM1HQ9ULR3 514 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 GIT1Q9Y2X7 761 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 HBS1LQ9Y450 684 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ATP6V0A2Q9Y487 856 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 CEPT1Q9Y6K0 416 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 PFASO15067 1338 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 SPATA31A3Q5VYP0 1347 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 ADGRA3Q8IWK6 1321 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 BICDL2A1A5D9 508 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 UNCXA6NJT0 531 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 H0Y3Z8 333 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 FBP2O00757 339 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 PSMA7O14818 248 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 SORBS3O60504 671 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 EXOC3O60645 756 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 PDE8AO60658 829 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 CCDC22O60826 627 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 PDE5AO76074 875 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 WISP1O95388 367 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 CSF1RP07333 972 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 INHBBP09529 407 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 ZCCHC18P0CG32 403 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 RARBP10826 455 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 UQCRBP14927 111 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 ZNF12P17014 697 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 CD68P34810 354 aaPredicted RBP5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 PRKCIP41743 596 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 CHRNA4P43681 627 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 ALDH3B2P48448 385 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms