RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 MRPL45Q9BRJ2 306 aaKnown RBP22.19■■□□□ 1.14
PRDM4-205ENST00000550376 SCINQ9Y6U3 715 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 SCN1AP35498 2009 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 TCRBV5S1A1TA0A578 114 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 MICAL2O94851 1124 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 CYP3A5P20815 502 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 SLC1A1P43005 524 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 CUL1Q13616 776 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 CYP4F22Q6NT55 531 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 NOTUMQ6P988 496 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.19■■□□□ 1.14
PRDM4-205ENST00000550376 PCDHGC3Q9UN70 934 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 C2CD2Q9Y426 696 aa22.19■■□□□ 1.14
PRDM4-205ENST00000550376 M0QYV0 167 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 HSF2BPO75031 334 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 LSM8O95777 96 aaKnown RBP22.18■■□□□ 1.14
PRDM4-205ENST00000550376 ERBB2P04626 1255 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 IBSPP21815 317 aaPredicted RBP22.18■■□□□ 1.14
PRDM4-205ENST00000550376 COILP38432 576 aaPredicted RBP22.18■■□□□ 1.14
PRDM4-205ENST00000550376 SGO2Q562F6 1265 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 KCTD16Q68DU8 428 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 DUPD1Q68J44 220 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 TRIB2Q92519 343 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 SYNCQ9H7C4 482 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 MED4Q9NPJ6 270 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 PARP2Q9UGN5 583 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 CEP83Q9Y592 693 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 NME7Q9Y5B8 376 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 C17orf102A2RUQ5 167 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 CALB1P05937 261 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 PSMC1P62191 440 aaKnown RBP22.18■■□□□ 1.14
PRDM4-205ENST00000550376 DNAJC21Q5F1R6 531 aaKnown RBP22.18■■□□□ 1.14
PRDM4-205ENST00000550376 CFAP58Q5T655 872 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 ZNF771Q7L3S4 317 aaPredicted RBP22.18■■□□□ 1.14
PRDM4-205ENST00000550376 PRUNE1Q86TP1 453 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 CACNG4Q9UBN1 327 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 ITGA11Q9UKX5 1188 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 MTUS1Q9ULD2 1270 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 CITO14578 2027 aa22.18■■□□□ 1.14
PRDM4-205ENST00000550376 IGFBP6P24592 240 aaPredicted RBP22.17■■□□□ 1.14
PRDM4-205ENST00000550376 CHRNA3P32297 505 aa22.17■■□□□ 1.14
PRDM4-205ENST00000550376 YWHAEP62258 255 aaKnown RBP22.17■■□□□ 1.14
PRDM4-205ENST00000550376 UAP1Q16222 522 aaPredicted RBP22.17■■□□□ 1.14
PRDM4-205ENST00000550376 RHOT1Q8IXI2 618 aa22.17■■□□□ 1.14
PRDM4-205ENST00000550376 IQCKQ8N0W5 287 aa22.17■■□□□ 1.14
PRDM4-205ENST00000550376 SNX27Q96L92 541 aa22.17■■□□□ 1.14
PRDM4-205ENST00000550376 FAM49BQ9NUQ9 324 aa22.17■■□□□ 1.14
PRDM4-205ENST00000550376 TULP2O00295 520 aa22.17■■□□□ 1.14
PRDM4-205ENST00000550376 FSCN2O14926 492 aa22.17■■□□□ 1.14
PRDM4-205ENST00000550376 CTSHP09668 335 aa22.17■■□□□ 1.14
PRDM4-205ENST00000550376 HSD17B3P37058 310 aa22.17■■□□□ 1.14
PRDM4-205ENST00000550376 RPL21P46778 160 aaKnown RBP22.17■■□□□ 1.14
PRDM4-205ENST00000550376 DCAF4L1Q3SXM0 396 aa22.17■■□□□ 1.14
PRDM4-205ENST00000550376 ACOT1Q86TX2 421 aa22.17■■□□□ 1.14
PRDM4-205ENST00000550376 WNT8BQ93098 351 aa22.17■■□□□ 1.14
PRDM4-205ENST00000550376 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.17■■□□□ 1.14
PRDM4-205ENST00000550376 ZSWIM8A7E2V4 1837 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 ERICH4A6NGS2 130 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 ATICP31939 592 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 FLT3LGP49771 235 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 SKIDA1Q1XH10 827 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 SMTNL2Q2TAL5 461 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 ARRDC4Q8NCT1 418 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 FBXO25Q8TCJ0 367 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 SEC14L1Q92503 715 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 LRRC4CQ9HCJ2 640 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 IP6K2Q9UHH9 426 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 MEIS3P2A8K0S8 358 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 YARSP54577 528 aaKnown RBP22.16■■□□□ 1.14
PRDM4-205ENST00000550376 DHX9Q08211 1270 aaKnown RBP22.16■■□□□ 1.14
PRDM4-205ENST00000550376 FAM47CQ5HY64 1035 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 KCNT1Q5JUK3 1230 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 UBAP2Q5T6F2 1119 aaKnown RBP22.16■■□□□ 1.14
PRDM4-205ENST00000550376 ZNF618Q5T7W0 954 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 SH2D3CQ8N5H7 860 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 UBLCP1Q8WVY7 318 aaPredicted RBP22.16■■□□□ 1.14
PRDM4-205ENST00000550376 OSBPL7Q9BZF2 842 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 BARX2Q9UMQ3 279 aaPredicted RBP22.16■■□□□ 1.14
PRDM4-205ENST00000550376 PLAAQ9Y263 795 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 PASKQ96RG2 1323 aa22.16■■□□□ 1.14
PRDM4-205ENST00000550376 GRAP2O75791 330 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 KRT3P12035 628 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 AKR1A1P14550 325 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 CDH5P33151 784 aaPredicted RBP22.15■■□□□ 1.14
PRDM4-205ENST00000550376 VPS41P49754 854 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 RGS7P49802 495 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 PDE4CQ08493 712 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 NNTQ13423 1086 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 TTMPQ5BVD1 217 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 PPP1R15BQ5SWA1 713 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 SOCS4Q8WXH5 440 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 PIWIL1Q96J94 861 aaKnown RBP22.15■■□□□ 1.14
PRDM4-205ENST00000550376 RUFY1Q96T51 708 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 ZNF518BQ9C0D4 1074 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 RAB17Q9H0T7 212 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 PCYOX1Q9UHG3 505 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 ATP8A1Q9Y2Q0 1164 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 TLL2Q9Y6L7 1015 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 TRPM7Q96QT4 1865 aa22.15■■□□□ 1.14
PRDM4-205ENST00000550376 PAEPP09466 180 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms