RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 RABGGTAQ92696 567 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 TRIM43Q96BQ3 446 aaPredicted RBP5.04□□□□□ -1.6
SNRPF-202ENST00000549580 CEP95Q96GE4 821 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 GPHA2Q96T91 129 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 SMURF2Q9HAU4 748 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 MYO1AQ9UBC5 1043 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 SLC23A1Q9UHI7 598 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 PACSIN3Q9UKS6 424 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 PCDHGB2Q9Y5G2 931 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 ZMYM3Q14202 1370 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 hCG_1642624A0A1W2PR95 340 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 GRID2IPA4D2P6 1211 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 PROB1E7EW31 1015 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 RHOBTB3O94955 611 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 SBK3P0C264 359 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 MTHFD1P11586 935 aaKnown RBP5.03□□□□□ -1.6
SNRPF-202ENST00000549580 TECP42680 631 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 HSPA7P48741 367 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 GZMKP49863 264 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 APBA1Q02410 837 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 EXOSC9Q06265 439 aaKnown RBP5.03□□□□□ -1.6
SNRPF-202ENST00000549580 MRPL49Q13405 166 aaKnown RBP5.03□□□□□ -1.6
SNRPF-202ENST00000549580 KIF22Q14807 665 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 ATP2B3Q16720 1220 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 MPEG1Q2M385 716 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 SLC35G1Q2M3R5 365 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 C3orf38Q5JPI3 329 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 ZNF362Q5T0B9 420 aaPredicted RBP5.03□□□□□ -1.6
SNRPF-202ENST00000549580 KLHDC7AQ5VTJ3 777 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 MICU3Q86XE3 530 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 CCDC33Q8N5R6 958 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 OR6B3Q8NGW1 331 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 SYNPO2LQ9H987 977 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 AGO4Q9HCK5 861 aaKnown RBP5.03□□□□□ -1.6
SNRPF-202ENST00000549580 CASS4Q9NQ75 786 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 RLIMQ9NVW2 624 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 FAM30AQ9NZY2 134 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 RUVBL1Q9Y265 456 aaKnown RBP5.03□□□□□ -1.6
SNRPF-202ENST00000549580 DGKBQ9Y6T7 804 aa5.03□□□□□ -1.6
SNRPF-202ENST00000549580 ZAR1LA6NP61 321 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 BTN3A1O00481 513 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 SH3BP5O60239 455 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 TLR5O60602 858 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 PLA2G6O60733 806 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 ABHD16AO95870 558 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 HARSP12081 509 aaKnown RBP5.02□□□□□ -1.61
SNRPF-202ENST00000549580 FGFR2P21802 821 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 CHKAP35790 457 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 RABGGTBP53611 331 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 PTTG1IPP53801 180 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 CREMQ03060 361 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 ARL13BQ3SXY8 428 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 CCDC93Q567U6 631 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 RABL3Q5HYI8 236 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 EPHA10Q5JZY3 1008 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 KRT40Q6A162 431 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 PGBD2Q6P3X8 592 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 TMED8Q6PL24 325 aaPredicted RBP5.02□□□□□ -1.61
SNRPF-202ENST00000549580 ZNF783Q6ZMS7 281 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 ADGRG3Q86Y34 549 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 ELOA2Q8IYF1 753 aaPredicted RBP5.02□□□□□ -1.61
SNRPF-202ENST00000549580 SYTL1Q8IYJ3 562 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 SPATA5Q8NB90 893 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 OR5M3Q8NGP4 307 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 PROKR1Q8TCW9 393 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 TNPO1Q92973 898 aaKnown RBP5.02□□□□□ -1.61
SNRPF-202ENST00000549580 MYOCQ99972 504 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 NDC1Q9BTX1 674 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 ISCA1Q9BUE6 129 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.02□□□□□ -1.61
SNRPF-202ENST00000549580 SACM1LQ9NTJ5 587 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 JKAMPQ9P055 326 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 PAXBP1Q9Y5B6 917 aa5.02□□□□□ -1.61
SNRPF-202ENST00000549580 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.02□□□□□ -1.61
SNRPF-202ENST00000549580 UBE2QL1A1L167 161 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 CXorf49A8MYA2 514 aaPredicted RBP5.01□□□□□ -1.61
SNRPF-202ENST00000549580 KIAA0355O15063 1070 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 PJA2O43164 708 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 TBC1D4O60343 1298 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 GJB1P08034 283 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 RAP2AP10114 183 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 CDK4P11802 303 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 ATP5JP18859 108 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 SLC6A4P31645 630 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 PPM1FP49593 454 aaPredicted RBP5.01□□□□□ -1.61
SNRPF-202ENST00000549580 CLK3P49761 638 aaKnown RBP5.01□□□□□ -1.61
SNRPF-202ENST00000549580 RENBPP51606 427 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 MAPK10P53779 464 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 RPS16P62249 146 aaKnown RBP5.01□□□□□ -1.61
SNRPF-202ENST00000549580 ICA1Q05084 483 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 HABP2Q14520 560 aaPredicted RBP5.01□□□□□ -1.61
SNRPF-202ENST00000549580 RALBP1Q15311 655 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 PUM3Q15397 648 aaKnown RBP5.01□□□□□ -1.61
SNRPF-202ENST00000549580 ELF2Q15723 593 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 C1QL3Q5VWW1 255 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 FAM111BQ6SJ93 734 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 OLFML1Q6UWY5 402 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 LDHAL6AQ6ZMR3 332 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 ZNF354CQ86Y25 554 aa5.01□□□□□ -1.61
SNRPF-202ENST00000549580 PDSS2Q86YH6 399 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms