RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 EMID1Q96A84 441 aaPredicted RBP11.73□□□□□ -0.53
LINC00661-204ENST00000549354 RSRC1Q96IZ7 334 aaKnown RBP11.73□□□□□ -0.53
LINC00661-204ENST00000549354 NSRP1Q9H0G5 558 aaKnown RBP11.73□□□□□ -0.53
LINC00661-204ENST00000549354 HOMER3Q9NSC5 361 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 PCSK1NQ9UHG2 260 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 GGA2Q9UJY4 613 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 KRT19P08727 400 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 CYP24A1Q07973 514 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 KIF22Q14807 665 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 HSDL1Q3SXM5 330 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 WLSQ5T9L3 541 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 CYP4A22Q5TCH4 519 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 TAPT1Q6NXT6 567 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 KATNBL1Q9H079 304 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 ZWILCHQ9H900 591 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 ETNK1Q9HBU6 452 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 DONSONQ9NYP3 566 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 NXF1Q9UBU9 619 aaKnown RBP11.72□□□□□ -0.53
LINC00661-204ENST00000549354 DNAJC8O75937 253 aaPredicted RBP11.72□□□□□ -0.53
LINC00661-204ENST00000549354 SUN1O94901 812 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 CD19P15391 556 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 NQO1P15559 274 aaKnown RBP11.72□□□□□ -0.53
LINC00661-204ENST00000549354 FASTKD3Q14CZ7 662 aaKnown RBP11.72□□□□□ -0.53
LINC00661-204ENST00000549354 GPD1LQ8N335 351 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 EPS8L1Q8TE68 723 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 VTA1Q9NP79 307 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 NCANO14594 1321 aa11.72□□□□□ -0.53
LINC00661-204ENST00000549354 A0A1B0GUA9 196 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 E2F8A0AVK6 867 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 RARGP13631 454 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 PEX5P50542 639 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 GPC3P51654 580 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 TTLL4Q14679 1199 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 SGSM1Q2NKQ1 1148 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 MDH1BQ5I0G3 518 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 IER5Q5VY09 327 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 CDCA2Q69YH5 1023 aaPredicted RBP11.71□□□□□ -0.53
LINC00661-204ENST00000549354 C15orf39Q6ZRI6 1047 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 ARMCX2Q7L311 632 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 SPDL1Q96EA4 605 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 TMEM8AQ9HCN3 771 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 SLC12A4Q9UP95 1085 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 PCDHB4Q9Y5E5 795 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 MKI67P46013 3256 aaKnown RBP11.71□□□□□ -0.53
LINC00661-204ENST00000549354 BHMG1C9JSJ3 638 aaPredicted RBP11.71□□□□□ -0.53
LINC00661-204ENST00000549354 PODXLO00592 558 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 EXTL3O43909 919 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 WEE2P0C1S8 567 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 SRGAP2CP0DJJ0 459 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 CYP11B1P15538 503 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 TARSP26639 723 aaKnown RBP11.71□□□□□ -0.53
LINC00661-204ENST00000549354 GAD2Q05329 585 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 VSTM1Q6UX27 236 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 SV2AQ7L0J3 742 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 VSIG1Q86XK7 387 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 FBXO16Q8IX29 292 aaPredicted RBP11.71□□□□□ -0.53
LINC00661-204ENST00000549354 C2orf69Q8N8R5 385 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 PSPC1Q8WXF1 523 aaKnown RBP11.71□□□□□ -0.53
LINC00661-204ENST00000549354 SAYSD1Q9NPB0 183 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 AAASQ9NRG9 546 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 ANAPC5Q9UJX4 755 aa11.71□□□□□ -0.53
LINC00661-204ENST00000549354 UMODL1Q5DID0 1318 aa11.71□□□□□ -0.54
LINC00661-204ENST00000549354 ADGRA2Q96PE1 1338 aa11.71□□□□□ -0.54
LINC00661-204ENST00000549354 ASAP2O43150 1006 aa11.71□□□□□ -0.54
LINC00661-204ENST00000549354 ADCY3O60266 1144 aa11.71□□□□□ -0.54
LINC00661-204ENST00000549354 WNT7BP56706 349 aa11.71□□□□□ -0.54
LINC00661-204ENST00000549354 RWDD2BP57060 319 aa11.71□□□□□ -0.54
LINC00661-204ENST00000549354 ARHGAP1Q07960 439 aa11.71□□□□□ -0.54
LINC00661-204ENST00000549354 NAIF1Q69YI7 327 aaPredicted RBP11.71□□□□□ -0.54
LINC00661-204ENST00000549354 SLFN12LQ6IEE8 588 aa11.71□□□□□ -0.54
LINC00661-204ENST00000549354 ISLR2Q6UXK2 745 aa11.71□□□□□ -0.54
LINC00661-204ENST00000549354 SPATA21Q7Z572 469 aa11.71□□□□□ -0.54
LINC00661-204ENST00000549354 SMARCAD1Q9H4L7 1026 aa11.71□□□□□ -0.54
LINC00661-204ENST00000549354 C2orf71A6NGG8 1288 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 RASA4BC9J798 803 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 RASA4O43374 803 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 GRAP2O75791 330 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 GJB1P08034 283 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 TXNP10599 105 aaKnown RBP11.7□□□□□ -0.54
LINC00661-204ENST00000549354 ADORA2AP29274 412 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 NUMBP49757 651 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 RPL7AP62424 266 aaKnown RBP11.7□□□□□ -0.54
LINC00661-204ENST00000549354 CAPSQ13938 189 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 GRB14Q14449 540 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 SLMAPQ14BN4 828 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 KRT39Q6A163 491 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 USP37Q86T82 979 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 SPATA33Q96N06 139 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 NT5C1BQ96P26 610 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 PTPN18Q99952 460 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 ENO4A6NNW6 628 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 LAMC2Q13753 1193 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 PSMD6Q15008 389 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 EML3Q32P44 896 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 DCUN1D2Q6PH85 259 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 ZPBP2Q6X784 338 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 ILDR2Q71H61 639 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 C3orf20Q8ND61 904 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 PITPNM3Q9BZ71 974 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 PDGFCQ9NRA1 345 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms