RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 APOBEC3GQ9HC16 384 aaKnown RBP10.41□□□□□ -0.74
SMARCD1-205ENST00000548573 PXMP2Q9NR77 195 aa10.41□□□□□ -0.74
SMARCD1-205ENST00000548573 KLHL11Q9NVR0 708 aa10.41□□□□□ -0.74
SMARCD1-205ENST00000548573 DDX56Q9NY93 547 aaKnown RBP10.41□□□□□ -0.74
SMARCD1-205ENST00000548573 ANKFY1Q9P2R3 1169 aa10.41□□□□□ -0.74
SMARCD1-205ENST00000548573 RABGEF1Q9UJ41 708 aa10.41□□□□□ -0.74
SMARCD1-205ENST00000548573 FARP1Q9Y4F1 1045 aaPredicted RBP10.41□□□□□ -0.74
SMARCD1-205ENST00000548573 TCRBV5S1A1TA0A578 114 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 YDJCA8MPS7 323 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 MAFGO15525 162 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 SKAP2O75563 359 aaPredicted RBP10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 CALB1P05937 261 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 FGFR1P11362 822 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 MARK3P27448 753 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 SOX10P56693 466 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 GPX6P59796 221 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 RPL7AP62424 266 aaKnown RBP10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 TAP1Q03518 808 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 ZNF252P-AS1Q0IIN9 211 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 HIF1AQ16665 826 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 CTC1Q2NKJ3 1217 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 KLHL38Q2WGJ6 581 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 TFDP3Q5H9I0 405 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 ZFYVE27Q5T4F4 411 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 LMBRD2Q68DH5 695 aaPredicted RBP10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 CLNKQ7Z7G1 428 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 LMNTD2Q8IXW0 634 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 CPXCR1Q8N123 301 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 ATP11CQ8NB49 1132 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 SLC35B2Q8TB61 432 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 LPAR1Q92633 364 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 FAM84AQ96KN4 292 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 RMDN3Q96TC7 470 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 FRMD8P1Q9BZ68 369 aaPredicted RBP10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 DENND2DQ9H6A0 471 aaPredicted RBP10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 XPNPEP1Q9NQW7 623 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 ZFATQ9P243 1243 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 GABBR1Q9UBS5 961 aa10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 AGO2Q9UKV8 859 aaKnown RBP10.4□□□□□ -0.74
SMARCD1-205ENST00000548573 TESPA1A2RU30 521 aaPredicted RBP10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 H0YIN7 160 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 CLGNO14967 610 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 ZNF862O60290 1169 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 TCF4P15884 667 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 ACADSP16219 412 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 TSHRP16473 764 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 CDC25CP30307 473 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 GCKP35557 465 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 CDKN2BP42772 138 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 ZNF132P52740 706 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 WNT7BP56706 349 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 NLRP11P59045 1033 aaKnown RBP10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 MRPS35P82673 323 aaKnown RBP10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 MAP3K10Q02779 954 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 PIGHQ14442 188 aaPredicted RBP10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 DLGAP5Q15398 846 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 MAPK6Q16659 721 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 HP1BP3Q5SSJ5 553 aaPredicted RBP10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 APLFQ8IW19 511 aaPredicted RBP10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 PPIL6Q8IXY8 311 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 DHX37Q8IY37 1157 aaKnown RBP10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 ZNF276Q8N554 614 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 NIPA2Q8N8Q9 360 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 SUPT20HQ8NEM7 779 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 MZB1Q8WU39 189 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 ZNF606Q8WXB4 792 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 GPRASP2Q96D09 838 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 OSBPL1AQ9BXW6 950 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 RAVER2Q9HCJ3 691 aaKnown RBP10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 NPHS2Q9NP85 383 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 ZMYND8Q9ULU4 1186 aaPredicted RBP10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 EFR3BQ9Y2G0 817 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 SNCAIPQ9Y6H5 919 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 IVNS1ABPQ9Y6Y0 642 aa10.4□□□□□ -0.75
SMARCD1-205ENST00000548573 CLUHO75153 1309 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 PTPRJQ12913 1337 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 PSME4Q14997 1843 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 E7ESA3 106 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 SGK1O00141 431 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 SMAPO00193 183 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 KIF3CO14782 793 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 CCDC22O60826 627 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 LSM8O95777 96 aaKnown RBP10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 LDHAP00338 332 aaKnown RBP10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 PIGRP01833 764 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 GLRA2P23416 452 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 ADRA1DP25100 572 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 PTDSS1P48651 473 aaKnown RBP10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 ARL4CP56559 192 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 NOP14P78316 857 aaKnown RBP10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 SEPT7Q16181 437 aaKnown RBP10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 TSNAXIP1Q2TAA8 658 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 ARHGEF16Q5VV41 709 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 SLFN12LQ6IEE8 588 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 ANO7Q6IWH7 933 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 RSBN1LQ6PCB5 846 aaPredicted RBP10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 C4orf50Q6ZRC1 276 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 CAPN12Q6ZSI9 719 aa10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 MTDHQ86UE4 582 aaKnown RBP10.39□□□□□ -0.75
SMARCD1-205ENST00000548573 FAM83AQ86UY5 434 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms