RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 YWHAEP62258 255 aaKnown RBP24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 HYAL1Q12794 435 aa24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 CCDC85BQ15834 202 aaPredicted RBP24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 RRAGAQ7L523 313 aa24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 PALB2Q86YC2 1186 aa24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 PPM1EQ8WY54 764 aa24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 FAM81BQ96LP2 452 aa24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 ERGIC2Q96RQ1 377 aa24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 ZCWPW1Q9H0M4 648 aa24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 IGFLR1Q9H665 355 aa24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 UBE2TQ9NPD8 197 aaPredicted RBP24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 TEX33O43247 280 aa24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 HCRTO43612 131 aa24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 ACAT1P24752 427 aaKnown RBP24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 CLCN4P51793 760 aa24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 INCA1Q0VD86 236 aa24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 SYCP1Q15431 976 aa24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 UNC93AQ86WB7 457 aa24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 TMEM209Q96SK2 561 aa24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 LSM14BQ9BX40 385 aaKnown RBP24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 SIX2Q9NPC8 291 aa24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 CISHQ9NSE2 258 aa24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 CDH9Q9ULB4 789 aa24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 NME7Q9Y5B8 376 aa24.74■■□□□ 1.55
SMARCD1-203ENST00000547247 GLUD1P00367 558 aa24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 C1RP00736 705 aa24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 OR4Q2P0C623 313 aa24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 APBA1Q02410 837 aa24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 GPR17Q13304 367 aa24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 NR1I3Q14994 352 aa24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 INTS6LQ5JSJ4 861 aaKnown RBP24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 ENOSF1Q7L5Y1 443 aa24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 DCP1BQ8IZD4 617 aaKnown RBP24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 ZNF461Q8TAF7 563 aa24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 SYT15Q9BQS2 421 aa24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 SIK3Q9Y2K2 1263 aa24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 HCFC2Q9Y5Z7 792 aa24.73■■□□□ 1.55
SMARCD1-203ENST00000547247 WDR27A2RRH5 827 aa24.72■■□□□ 1.55
SMARCD1-203ENST00000547247 TGM5O43548 720 aa24.72■■□□□ 1.55
SMARCD1-203ENST00000547247 CILPO75339 1184 aa24.72■■□□□ 1.55
SMARCD1-203ENST00000547247 GTF2F1P35269 517 aaKnown RBP eCLIP24.72■■□□□ 1.556e-17■■■■■ 36.5
SMARCD1-203ENST00000547247 NDST1P52848 882 aa24.72■■□□□ 1.55
SMARCD1-203ENST00000547247 MFAP3P55082 362 aa24.72■■□□□ 1.55
SMARCD1-203ENST00000547247 TPGS2Q68CL5 300 aa24.72■■□□□ 1.55
SMARCD1-203ENST00000547247 GJB7Q6PEY0 223 aa24.72■■□□□ 1.55
SMARCD1-203ENST00000547247 KAT5Q92993 513 aa24.72■■□□□ 1.55
SMARCD1-203ENST00000547247 TNIP3Q96KP6 325 aa24.72■■□□□ 1.55
SMARCD1-203ENST00000547247 PCMTD1Q96MG8 357 aaPredicted RBP24.72■■□□□ 1.55
SMARCD1-203ENST00000547247 PLCB1Q9NQ66 1216 aa24.72■■□□□ 1.55
SMARCD1-203ENST00000547247 NCK2O43639 380 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 ABLIM3O94929 683 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 KLHDC7AQ5VTJ3 777 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 DPY19L2P1Q6NXN4 242 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 LILRA6Q6PI73 481 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 EFHBQ8N7U6 833 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 SLC22A17Q8WUG5 538 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 JAKMIP2Q96AA8 810 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 KREMEN1Q96MU8 473 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 NT5C1AQ9BXI3 368 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 DNAI2Q9GZS0 605 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 IFNKQ9P0W0 207 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 ATP2C2O75185 946 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 TRIM21P19474 475 aaKnown RBP24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 PSMC1P62191 440 aaKnown RBP24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 SMARCB1Q12824 385 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 SLC39A12Q504Y0 691 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 LRRTM3Q86VH5 581 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 HMGXB4Q9UGU5 601 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 AFF4Q9UHB7 1163 aaKnown RBP24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 DNAJC12Q9UKB3 198 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 GTF3C4Q9UKN8 822 aa24.71■■□□□ 1.55
SMARCD1-203ENST00000547247 TPM3P06753 285 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 ATF2P15336 505 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 EPCAMP16422 314 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 PTPN1P18031 435 aaKnown RBP24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 RFX1P22670 979 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 KLK7P49862 253 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 KCNC3Q14003 757 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 MAPRE1Q15691 268 aaKnown RBP24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 NFE2Q16621 373 aaPredicted RBP24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 LLGL2Q6P1M3 1020 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 FAM171BQ6P995 826 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 RNF19BQ6ZMZ0 732 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 UBR7Q8N806 425 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 B3GALNT2Q8NCR0 500 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 WHAMMQ8TF30 809 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 DPEP3Q9H4B8 488 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 CRTAC1Q9NQ79 661 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 FAM207AQ9NSI2 230 aaPredicted RBP24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 DPP7Q9UHL4 492 aa24.7■■□□□ 1.54
SMARCD1-203ENST00000547247 A0A1W2PQC6 194 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 MYBPHLA2RUH7 354 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 SPATA31D3P0C874 917 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 UCHL3P15374 230 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 ARHGAP44Q17R89 818 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 ZNF394Q53GI3 561 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 SPATA31D4Q6ZUB0 917 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 ACOT1Q86TX2 421 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 CRYBG2Q8N1P7 616 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 KREMEN2Q8NCW0 462 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms