RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ELMOD1Q8N336 334 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 SPPL2BQ8TCT7 592 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 KBTBD7Q8WVZ9 684 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 FGF13Q92913 245 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 SYAP1Q96A49 352 aaPredicted RBP12.74□□□□□ -0.37
YBX3-217ENST00000546164 PKMYT1Q99640 499 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 XYLT2Q9H1B5 865 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 KCNK12Q9HB15 430 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 HCFC1R1Q9NWW0 138 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 DDX43Q9NXZ2 648 aaKnown RBP12.74□□□□□ -0.37
YBX3-217ENST00000546164 CEP72Q9P209 647 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 MRPS23Q9Y3D9 190 aaKnown RBP12.74□□□□□ -0.37
YBX3-217ENST00000546164 ASB3Q9Y575 518 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 DOCK6Q96HP0 2047 aa12.74□□□□□ -0.37
YBX3-217ENST00000546164 ZDBF2Q9HCK1 2354 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 ANHXE9PGG2 379 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 ZNF197O14709 1029 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 TACC1O75410 805 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 WARSP23381 471 aaKnown RBP12.73□□□□□ -0.37
YBX3-217ENST00000546164 PCSK1P29120 753 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 PPP1R2P41236 205 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 TUFMP49411 452 aaKnown RBP12.73□□□□□ -0.37
YBX3-217ENST00000546164 VAMP7P51809 220 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 DLG4P78352 724 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 SIGLEC14Q08ET2 396 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 ADAM9Q13443 819 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 TRPC3Q13507 836 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 ZACNQ401N2 412 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 SLC39A12Q504Y0 691 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 INTS6LQ5JSJ4 861 aaKnown RBP12.73□□□□□ -0.37
YBX3-217ENST00000546164 PRSS36Q5K4E3 855 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 C1orf220Q5T0J3 134 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 FOXR2Q6PJQ5 311 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 BMP8AQ7Z5Y6 402 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 NPAS3Q8IXF0 933 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 ITFG1Q8TB96 612 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 ERCC4Q92889 916 aaPredicted RBP12.73□□□□□ -0.37
YBX3-217ENST00000546164 ZNF512Q96ME7 567 aaPredicted RBP12.73□□□□□ -0.37
YBX3-217ENST00000546164 LRFN3Q9BTN0 628 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 DNAJC25Q9H1X3 360 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 ABCB6Q9NP58 842 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 GDE1Q9NZC3 331 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 MAN1B1Q9UKM7 699 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 MYO10Q9HD67 2058 aa12.73□□□□□ -0.37
YBX3-217ENST00000546164 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 CETN3O15182 167 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 PHACTR2O75167 634 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 VNN1O95497 513 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 HAPLN1P10915 354 aaPredicted RBP12.72□□□□□ -0.37
YBX3-217ENST00000546164 ALDH1A3P47895 512 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 EPHB3P54753 998 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 MYL6P60660 151 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 LRRC63Q05C16 580 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 BIRC3Q13489 604 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 TDGQ13569 410 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 HTR4Q13639 388 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 NCOA4Q13772 614 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 SLC5A9Q2M3M2 681 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 WDR72Q3MJ13 1102 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 CYP4A22Q5TCH4 519 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 FAM171BQ6P995 826 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 PDZD4Q76G19 769 aaPredicted RBP12.72□□□□□ -0.37
YBX3-217ENST00000546164 SV2AQ7L0J3 742 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 FAM186BQ8IYM0 893 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 TTC9BQ8N6N2 239 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 PSMG2Q969U7 264 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 CORO1BQ9BR76 489 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 LRRC3Q9BY71 257 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 ASAH2Q9NR71 780 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 TMLHEQ9NVH6 421 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 SLC27A5Q9Y2P5 690 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 PCDHB5Q9Y5E4 795 aa12.72□□□□□ -0.37
YBX3-217ENST00000546164 FAM86C2PA6NEL3 165 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 PSMA7O14818 248 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 SLC16A3O15427 465 aaKnown RBP12.71□□□□□ -0.37
YBX3-217ENST00000546164 KRT13P13646 458 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 ATF6P18850 670 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 GTF2H1P32780 548 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 CCR2P41597 374 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 PMS1P54277 932 aaKnown RBP12.71□□□□□ -0.37
YBX3-217ENST00000546164 TNNC1P63316 161 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 FKBP3Q00688 224 aaKnown RBP12.71□□□□□ -0.37
YBX3-217ENST00000546164 STIM1Q13586 685 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 MORC3Q14149 939 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 ZNF699Q32M78 642 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 CFAP221Q4G0U5 840 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 ITIH5Q86UX2 942 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 TMC8Q8IU68 726 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 TAF4BQ92750 862 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 ASIC4Q96FT7 647 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 DHTKD1Q96HY7 919 aaPredicted RBP12.71□□□□□ -0.37
YBX3-217ENST00000546164 FUBP3Q96I24 572 aaKnown RBP eCLIP12.71□□□□□ -0.37
YBX3-217ENST00000546164 MMS19Q96T76 1030 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 TSG101Q99816 390 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 MRPL45Q9BRJ2 306 aaKnown RBP12.71□□□□□ -0.37
YBX3-217ENST00000546164 CDH9Q9ULB4 789 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 DUSP12Q9UNI6 340 aa12.71□□□□□ -0.37
YBX3-217ENST00000546164 MYBPHLA2RUH7 354 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 TMEM221A6NGB7 291 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 M0R296 226 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms