RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 MIER2Q8N344 545 aa8.98□□□□□ -0.97
ATXN3-216ENST00000545170 TSPAN14Q8NG11 270 aa8.98□□□□□ -0.97
ATXN3-216ENST00000545170 EAF2Q96CJ1 260 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-216ENST00000545170 RNPEPL1Q9HAU8 725 aa8.98□□□□□ -0.97
ATXN3-216ENST00000545170 TRPV5Q9NQA5 729 aa8.98□□□□□ -0.97
ATXN3-216ENST00000545170 DNAAF2Q9NVR5 837 aaKnown RBP8.98□□□□□ -0.97
ATXN3-216ENST00000545170 BFARQ9NZS9 450 aa8.98□□□□□ -0.97
ATXN3-216ENST00000545170 PHF8Q9UPP1 1060 aa8.98□□□□□ -0.97
ATXN3-216ENST00000545170 MROH5Q6ZUA9 1318 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 CDK13Q14004 1512 aaKnown RBP8.97□□□□□ -0.97
ATXN3-216ENST00000545170 SMIM31A0A1B0GVY4 71 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 FAM196BA6NMK8 535 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 PTGES3LE9PB15 166 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 AXIN1O15169 862 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 TLR2O60603 784 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 NR3C1P04150 777 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 FGFR3P22607 806 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 ALDH6A1Q02252 535 aaKnown RBP8.97□□□□□ -0.97
ATXN3-216ENST00000545170 SPOUT1Q5T280 376 aaKnown RBP8.97□□□□□ -0.97
ATXN3-216ENST00000545170 C6orf183Q5T699 404 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 SYTL5Q8TDW5 730 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-216ENST00000545170 SSH3Q8TE77 659 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 KCTD4Q8WVF5 259 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 OTUD5Q96G74 571 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 DDX50Q9BQ39 737 aaKnown RBP8.97□□□□□ -0.97
ATXN3-216ENST00000545170 TIMMDC1Q9NPL8 285 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 RNMTO43148 476 aaKnown RBP8.97□□□□□ -0.97
ATXN3-216ENST00000545170 NOS1APO75052 506 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-216ENST00000545170 SHROOM1Q2M3G4 852 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-216ENST00000545170 EGFLAMQ63HQ2 1017 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 CCDC33Q8N5R6 958 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 NACC1Q96RE7 527 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 ANKZF1Q9H8Y5 726 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 ZDHHC9Q9Y397 364 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 MRPL11Q9Y3B7 192 aaKnown RBP8.97□□□□□ -0.97
ATXN3-216ENST00000545170 SUPT3HB4E1H0 165 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 ATP6V1C1P21283 382 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 FASP25445 335 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 CCNIQ14094 377 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 PYDC2Q56P42 97 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 TMPRSS6Q8IU80 811 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 LRRC17Q8N6Y2 441 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 TRMT13Q9NUP7 481 aaKnown RBP8.97□□□□□ -0.97
ATXN3-216ENST00000545170 PSMD11O00231 422 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 PDE8AO60658 829 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 RTN2O75298 545 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 CCNKO75909 580 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 NR1I3Q14994 352 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 PYDC1Q8WXC3 89 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 KCTD14Q9BQ13 255 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-216ENST00000545170 THUMPD3Q9BV44 507 aaKnown RBP8.97□□□□□ -0.97
ATXN3-216ENST00000545170 K7ERI5 159 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 FOXN1O15353 648 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 NME5P56597 212 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 OSTNP61366 133 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 UBXN2AP68543 259 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 MROH9Q5TGP6 573 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 TRAPPC11Q7Z392 1133 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 IZUMO1Q8IYV9 350 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 RCOR2Q8IZ40 523 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 OR7A2PQ8NGA2 310 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 FAM118BQ9BPY3 351 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 VAV3Q9UKW4 847 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 TFR2Q9UP52 801 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 PLCH2O75038 1416 aa8.97□□□□□ -0.97
ATXN3-216ENST00000545170 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.96□□□□□ -0.97
ATXN3-216ENST00000545170 APRTP07741 180 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 GCLMP48507 274 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 BCAR1P56945 870 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 OLR1P78380 273 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 TFDP1Q14186 410 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 LPIN1Q14693 890 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 PKN2Q16513 984 aaKnown RBP8.96□□□□□ -0.97
ATXN3-216ENST00000545170 OCLNQ16625 522 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 TMEM270Q6UE05 265 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 MSL3Q8N5Y2 521 aaKnown RBP8.96□□□□□ -0.97
ATXN3-216ENST00000545170 OR6P1Q8NGX9 317 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 AGPAT1Q99943 283 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 COPS7BQ9H9Q2 264 aaPredicted RBP8.96□□□□□ -0.97
ATXN3-216ENST00000545170 ARPC4-TTLL3A0A0A6YYG9 625 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 KANSL1LA0AUZ9 987 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 SASH3O75995 380 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 HMGB2P26583 209 aaKnown RBP8.96□□□□□ -0.97
ATXN3-216ENST00000545170 HSF2Q03933 536 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 NRF1Q16656 503 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 ITPRIPL1Q6GPH6 555 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 CRELD2Q6UXH1 353 aaPredicted RBP8.96□□□□□ -0.97
ATXN3-216ENST00000545170 HTRA1Q92743 480 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 NUAK2Q9H093 628 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 PABPC3Q9H361 631 aaKnown RBP8.96□□□□□ -0.97
ATXN3-216ENST00000545170 OSBPL3Q9H4L5 887 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 UBA2Q9UBT2 640 aaPredicted RBP8.96□□□□□ -0.97
ATXN3-216ENST00000545170 AQRO60306 1485 aaKnown RBP eCLIP8.96□□□□□ -0.97
ATXN3-216ENST00000545170 GAS2O43903 313 aaKnown RBP8.96□□□□□ -0.97
ATXN3-216ENST00000545170 UFL1O94874 794 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 SLC1A1P43005 524 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 SLC18A3Q16572 532 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 PARP10Q53GL7 1025 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 RNF220Q5VTB9 566 aa8.96□□□□□ -0.97
ATXN3-216ENST00000545170 OTOAQ7RTW8 1153 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms