RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 DEFB103AP81534 67 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 GFPT1Q06210 699 aaPredicted RBP7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 KLHL30Q0D2K2 578 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 TUSC3Q13454 348 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 TRPC3Q13507 836 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 CCDC142Q17RM4 750 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 LONRF2Q1L5Z9 754 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 TDRD12Q587J7 1177 aaKnown RBP7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 ZNF667Q5HYK9 610 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 WDR44Q5JSH3 913 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 SMYD5Q6GMV2 418 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 TMCO2Q7Z6W1 182 aaPredicted RBP7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 COLGALT2Q8IYK4 626 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 RBBP8NLQ8NC74 664 aaPredicted RBP7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 PGBD4Q96DM1 585 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 MRPL45Q9BRJ2 306 aaKnown RBP7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 FUT8Q9BYC5 575 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 LACRTQ9GZZ8 138 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 VIPAS39Q9H9C1 493 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 UBN1Q9NPG3 1134 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 SLC38A7Q9NVC3 462 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 TAS2R14Q9NYV8 317 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 DNAJB4Q9UDY4 337 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 L1RE1Q9UN81 338 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 INPP5FQ9Y2H2 1132 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 HYOU1Q9Y4L1 999 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 VWA8A3KMH1 1905 aa7.46□□□□□ -1.21
HMGCS2-204ENST00000544913 PODXLO00592 558 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 CLSTN1O94985 981 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 KIF4AO95239 1232 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 ATP1A1P05023 1023 aaKnown RBP7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 LINC00271P0C7V0 271 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 CD58P19256 250 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 WDR5P61964 334 aaKnown RBP7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 NOMO2Q5JPE7 1267 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 BEND6Q5SZJ8 279 aaPredicted RBP7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 TMEM270Q6UE05 265 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 OSTM1Q86WC4 334 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 TMEM173Q86WV6 379 aaPredicted RBP7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 NPAS4Q8IUM7 802 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 GLYCTKQ8IVS8 523 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 HACE1Q8IYU2 909 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 MMGT1Q8N4V1 131 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 SLC4A11Q8NBS3 891 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 BCL7CQ8WUZ0 217 aaPredicted RBP7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 FAM81BQ96LP2 452 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 RTP3Q9BQQ7 232 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 PACSIN1Q9BY11 444 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 UBXN6Q9BZV1 441 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 CYP3A43Q9HB55 503 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 PRDM5Q9NQX1 630 aaPredicted RBP7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 ADAMTS1Q9UHI8 967 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 SALL4Q9UJQ4 1053 aa7.46□□□□□ -1.22
HMGCS2-204ENST00000544913 MACROD2A1Z1Q3 448 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 GRID2IPA4D2P6 1211 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 KPNA7A9QM74 516 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 TMEM189-UBE2V1I3L0A0 370 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 GABRDO14764 452 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 DGKIO75912 1065 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 MMEP08473 750 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 IBSPP21815 317 aaPredicted RBP7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 RPL9P32969 192 aaKnown RBP7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 TAF6P49848 677 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 CDR2Q01850 454 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 ORC1Q13415 861 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 SMC1AQ14683 1233 aaKnown RBP7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 TERF2Q15554 542 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 CFAP221Q4G0U5 840 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 TIGD5Q53EQ6 642 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 CCDC181Q5TID7 509 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 KIAA0319Q5VV43 1072 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 GLB1LQ6UWU2 654 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 BADQ92934 168 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 ZNF689Q96CS4 500 aaPredicted RBP7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 ABHD8Q96I13 439 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 RPS6KC1Q96S38 1066 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 AGPAT1Q99943 283 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 LPIN3Q9BQK8 851 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 IMPG2Q9BZV3 1241 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 FAM124BQ9H5Z6 455 aaPredicted RBP7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 NRDE2Q9H7Z3 1164 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 IL23AQ9NPF7 189 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 MED4Q9NPJ6 270 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 MARCH5Q9NX47 278 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 CXXC1Q9P0U4 656 aaPredicted RBP7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 TRIM10Q9UDY6 481 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 NAGPAQ9UK23 515 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 SNX9Q9Y5X1 595 aa7.45□□□□□ -1.22
HMGCS2-204ENST00000544913 A0A0A6YYK5 440 aaPredicted RBP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 ABHD14A-ACY1A0A1B0GW23 586 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 I3L4J1 428 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 M0QZQ0 153 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 ENC1O14682 589 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 XPOTO43592 962 aaKnown RBP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 CYP1A1P04798 512 aaPredicted RBP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 UNGP13051 313 aaPredicted RBP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 KRT5P13647 590 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 RAG1P15918 1043 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 LMO2P25791 158 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 PNPLA4P41247 253 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms