RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 GRM2Q14416 872 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 FAM26FQ5R3K3 315 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 GPR158Q5T848 1215 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 C1orf228Q6PIY5 440 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 UNC13DQ70J99 1090 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 FRMD5Q7Z6J6 570 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 SPATA2LQ8IUW3 424 aaPredicted RBP7.7□□□□□ -1.18
NUP43-206ENST00000543637 ARID3BQ8IVW6 561 aaPredicted RBP7.7□□□□□ -1.18
NUP43-206ENST00000543637 EFCAB13Q8IY85 973 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 TMEM130Q8N3G9 435 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 LRRC52Q8N7C0 313 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 FSIP1Q8NA03 581 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 SPATA18Q8TC71 538 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 GIPC2Q8TF65 315 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 FAM3CQ92520 227 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 TMEM209Q96SK2 561 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 C7orf25Q9BPX7 421 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 ACBD6Q9BR61 282 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 FOXQ1Q9C009 403 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 TRIM9Q9C026 710 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 IKZF4Q9H2S9 585 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 TASP1Q9H6P5 420 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 C8orf33Q9H7E9 229 aaPredicted RBP7.7□□□□□ -1.18
NUP43-206ENST00000543637 TRPV4Q9HBA0 871 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 PDE11AQ9HCR9 933 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 ZNF334Q9HCZ1 680 aaPredicted RBP7.7□□□□□ -1.18
NUP43-206ENST00000543637 LTB4R2Q9NPC1 389 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 TRPV5Q9NQA5 729 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 HEBP1Q9NRV9 189 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 INTS13Q9NVM9 706 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 DDX43Q9NXZ2 648 aaKnown RBP7.7□□□□□ -1.18
NUP43-206ENST00000543637 ABI2Q9NYB9 513 aaPredicted RBP7.7□□□□□ -1.18
NUP43-206ENST00000543637 HSPBP1Q9NZL4 362 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 CGNQ9P2M7 1197 aaKnown RBP7.7□□□□□ -1.18
NUP43-206ENST00000543637 UXTQ9UBK9 157 aaPredicted RBP7.7□□□□□ -1.18
NUP43-206ENST00000543637 NDRG2Q9UN36 371 aaKnown RBP7.7□□□□□ -1.18
NUP43-206ENST00000543637 PCDHA7Q9UN72 937 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 MAGED2Q9UNF1 606 aaPredicted RBP7.7□□□□□ -1.18
NUP43-206ENST00000543637 ATP6V1DQ9Y5K8 247 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 SNX9Q9Y5X1 595 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 TSC2P49815 1807 aa7.7□□□□□ -1.18
NUP43-206ENST00000543637 PATJQ8NI35 1801 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 CLIC2O15247 247 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 CHADO15335 359 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 KINO60870 393 aaKnown RBP7.69□□□□□ -1.18
NUP43-206ENST00000543637 KIF20AO95235 890 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 SP9P0CG40 484 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 HAPLN1P10915 354 aaPredicted RBP7.69□□□□□ -1.18
NUP43-206ENST00000543637 DDX6P26196 483 aaKnown RBP eCLIP7.69□□□□□ -1.18
NUP43-206ENST00000543637 AVPR1AP37288 418 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 VIPR2P41587 438 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 RPS9P46781 194 aaKnown RBP7.69□□□□□ -1.18
NUP43-206ENST00000543637 CASP5P51878 434 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 NRLP54845 237 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 MLLT6P55198 1093 aaPredicted RBP7.69□□□□□ -1.18
NUP43-206ENST00000543637 AMPD2Q01433 879 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 CSTF1Q05048 431 aaKnown RBP7.69□□□□□ -1.18
NUP43-206ENST00000543637 TRPC3Q13507 836 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 MAPRE1Q15691 268 aaKnown RBP7.69□□□□□ -1.18
NUP43-206ENST00000543637 E2F4Q16254 413 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 ARHGAP29Q52LW3 1261 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 SHC4Q6S5L8 630 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 VITQ6UXI7 678 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 C4orf50Q6ZRC1 276 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 WDR49Q8IV35 697 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 NELFCDQ8IXH7 590 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 TOP6BLQ8N6T0 577 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 CELF5Q8N6W0 485 aaKnown RBP7.69□□□□□ -1.18
NUP43-206ENST00000543637 C1orf127Q8N9H9 656 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 XXYLT1Q8NBI6 393 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 SHKBP1Q8TBC3 707 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 ATRIPQ8WXE1 791 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 MRPS31Q92665 395 aaKnown RBP7.69□□□□□ -1.18
NUP43-206ENST00000543637 SECISBP2LQ93073 1101 aaKnown RBP7.69□□□□□ -1.18
NUP43-206ENST00000543637 EXOC4Q96A65 974 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 MSANTD3Q96H12 275 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 CCDC34Q96HJ3 373 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 HPDLQ96IR7 371 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 SPATA32Q96LK8 384 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 ZSWIM3Q96MP5 696 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 MMS19Q96T76 1030 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 HINFPQ9BQA5 517 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 CBWD1Q9BRT8 395 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 PI4K2AQ9BTU6 479 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 DDX23Q9BUQ8 820 aaKnown RBP7.69□□□□□ -1.18
NUP43-206ENST00000543637 SNX25Q9H3E2 840 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 LMAN1LQ9HAT1 526 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 SLC39A2Q9NP94 309 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 GDAP2Q9NXN4 497 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 OBP2AQ9NY56 170 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 MAGEC2Q9UBF1 373 aaPredicted RBP7.69□□□□□ -1.18
NUP43-206ENST00000543637 USP25Q9UHP3 1055 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 RCOR1Q9UKL0 485 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 FBXO4Q9UKT5 387 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 MYH10P35580 1976 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 UBE4BO95155 1302 aa7.69□□□□□ -1.18
NUP43-206ENST00000543637 PRR23AA6NEV1 266 aa7.68□□□□□ -1.18
NUP43-206ENST00000543637 SOBPA7XYQ1 873 aa7.68□□□□□ -1.18
NUP43-206ENST00000543637 EXOC3O60645 756 aa7.68□□□□□ -1.18
NUP43-206ENST00000543637 LRRN2O75325 713 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms