RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CLMNQ96JQ2 1002 aa20.24■□□□□ 0.83
SUDS3-204ENST00000543473 MRPL4Q9BYD3 311 aaKnown RBP20.24■□□□□ 0.83
SUDS3-204ENST00000543473 KIAA0391O15091 583 aaKnown RBP20.24■□□□□ 0.83
SUDS3-204ENST00000543473 WDR72Q3MJ13 1102 aa20.24■□□□□ 0.83
SUDS3-204ENST00000543473 ZBTB41Q5SVQ8 909 aa20.24■□□□□ 0.83
SUDS3-204ENST00000543473 CAAP1Q9H8G2 361 aa20.24■□□□□ 0.83
SUDS3-204ENST00000543473 CDY2AQ9Y6F7 541 aa20.24■□□□□ 0.83
SUDS3-204ENST00000543473 CDY1Q9Y6F8 540 aa20.24■□□□□ 0.83
SUDS3-204ENST00000543473 SLC34A1Q06495 639 aa20.24■□□□□ 0.83
SUDS3-204ENST00000543473 INPP5AQ14642 412 aa20.24■□□□□ 0.83
SUDS3-204ENST00000543473 TMEM120AQ9BXJ8 343 aa20.24■□□□□ 0.83
SUDS3-204ENST00000543473 GTPBP10A4D1E9 387 aaKnown RBP20.23■□□□□ 0.83
SUDS3-204ENST00000543473 PSTPIP1O43586 416 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 SPDYCQ5MJ68 293 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 ANGEL2Q5VTE6 544 aaKnown RBP20.23■□□□□ 0.83
SUDS3-204ENST00000543473 C11orf63Q6NUN7 778 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 SLC20A1Q8WUM9 679 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 NMD3Q96D46 503 aaKnown RBP20.23■□□□□ 0.83
SUDS3-204ENST00000543473 CNBD2Q96M20 576 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 ARHGAP26Q9UNA1 814 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 REXO2Q9Y3B8 237 aaKnown RBP20.23■□□□□ 0.83
SUDS3-204ENST00000543473 TCRBV5S4A2TA0A5A2 114 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 ACAD9Q9H845 621 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 KRT16P08779 473 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 GMPSP49915 693 aaPredicted RBP20.23■□□□□ 0.83
SUDS3-204ENST00000543473 DDR1Q08345 913 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 FBXO36Q8NEA4 188 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 ZNF302Q9NR11 478 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 SLC24A2Q9UI40 661 aa20.23■□□□□ 0.83
SUDS3-204ENST00000543473 DDX3XO00571 662 aaKnown RBP eCLIP20.22■□□□□ 0.839e-11■■■■□ 26.3
SUDS3-204ENST00000543473 FDX1P10109 184 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 TRMT5Q32P41 509 aaKnown RBP20.22■□□□□ 0.83
SUDS3-204ENST00000543473 C2CD6Q53TS8 623 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 ZNF229Q9UJW7 825 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 PAFAH2Q99487 392 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 RSAD1Q9HA92 442 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 STAP1Q9ULZ2 295 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 CYP11B1P15538 503 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 RSPH3Q86UC2 560 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 IQCKQ8N0W5 287 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 ACSF2Q96CM8 615 aaPredicted RBP20.22■□□□□ 0.83
SUDS3-204ENST00000543473 RNPEPL1Q9HAU8 725 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 DGAT1O75907 488 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 DGKIO75912 1065 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 CBX6O95503 412 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 ITPRIPL1Q6GPH6 555 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 SAMD7Q7Z3H4 446 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 FAM167AQ96KS9 214 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 MYLK2Q9H1R3 596 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 ADNPQ9H2P0 1102 aa20.22■□□□□ 0.83
SUDS3-204ENST00000543473 FKBP6O75344 327 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 PBX1P40424 430 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 KCNJ2P63252 427 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 NFIAQ12857 509 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 CCNG2Q16589 344 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 IRGCQ6NXR0 463 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 SETD3Q86TU7 594 aaPredicted RBP20.21■□□□□ 0.83
SUDS3-204ENST00000543473 DDI1Q8WTU0 396 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 MYOZ2Q9NPC6 264 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 PRR12Q9ULL5 1215 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 SPOUT1Q5T280 376 aaKnown RBP20.21■□□□□ 0.83
SUDS3-204ENST00000543473 GGA3Q9NZ52 723 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 PDE5AO76074 875 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 CLPTM1O96005 669 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 SNRPFP62306 86 aaKnown RBP20.21■□□□□ 0.83
SUDS3-204ENST00000543473 TNFAIP2Q03169 654 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 ADGRA1Q86SQ6 560 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 C3P01024 1663 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 RNF225M0QZC1 329 aaPredicted RBP20.21■□□□□ 0.83
SUDS3-204ENST00000543473 DRD4P21917 467 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 CIITAP33076 1130 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 NEK2P51955 445 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 AQP5P55064 265 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 AGAP3Q96P47 875 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 BTBD10Q9BSF8 475 aa20.21■□□□□ 0.83
SUDS3-204ENST00000543473 SCHIP1Q9P0W5 487 aaPredicted RBP20.21■□□□□ 0.83
SUDS3-204ENST00000543473 MSH4O15457 936 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 RFC5P40937 340 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 HSPA13P48723 471 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 SLC5A5Q92911 643 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 TAGLN3Q9UI15 199 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 CPSF3Q9UKF6 684 aaKnown RBP20.2■□□□□ 0.82
SUDS3-204ENST00000543473 RRM1P23921 792 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 NUDT2P50583 147 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 ZNF668Q96K58 619 aaPredicted RBP20.2■□□□□ 0.82
SUDS3-204ENST00000543473 FRMD8Q9BZ67 464 aaPredicted RBP20.2■□□□□ 0.82
SUDS3-204ENST00000543473 E2F8A0AVK6 867 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 ANGPT2O15123 496 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 EPHB6O15197 1021 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 PYGMP11217 842 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 EFHC2Q5JST6 749 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 MFN1Q8IWA4 741 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 DDIASQ8IXT1 998 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 TTC39CQ8N584 583 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 B4GALNT2Q8NHY0 566 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 LPAR1Q92633 364 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 PNMA5Q96PV4 448 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 PCNX4Q63HM2 1172 aa20.2■□□□□ 0.82
SUDS3-204ENST00000543473 DEAF1O75398 565 aaPredicted RBP20.19■□□□□ 0.82
SUDS3-204ENST00000543473 RARAP10276 462 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms