RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CDH9Q9ULB4 789 aa24.64■■□□□ 1.54
HOMER3-205ENST00000542541 F8VZ95 297 aa24.64■■□□□ 1.53
HOMER3-205ENST00000542541 C2CD2LO14523 706 aa24.64■■□□□ 1.53
HOMER3-205ENST00000542541 CXCL14O95715 111 aa24.64■■□□□ 1.53
HOMER3-205ENST00000542541 GYPCP04921 128 aa24.64■■□□□ 1.53
HOMER3-205ENST00000542541 PDGFRBP09619 1106 aa24.64■■□□□ 1.53
HOMER3-205ENST00000542541 LMO2P25791 158 aa24.64■■□□□ 1.53
HOMER3-205ENST00000542541 JAM2P57087 298 aa24.64■■□□□ 1.53
HOMER3-205ENST00000542541 ZBED6P86452 979 aa24.64■■□□□ 1.53
HOMER3-205ENST00000542541 TSPY1Q01534 308 aa24.64■■□□□ 1.53
HOMER3-205ENST00000542541 SMC1AQ14683 1233 aaKnown RBP24.64■■□□□ 1.53
HOMER3-205ENST00000542541 FAM71AQ8IYT1 594 aa24.64■■□□□ 1.53
HOMER3-205ENST00000542541 MTRRQ9UBK8 725 aa24.64■■□□□ 1.53
HOMER3-205ENST00000542541 IRAK3Q9Y616 596 aa24.64■■□□□ 1.53
HOMER3-205ENST00000542541 NLRC5Q86WI3 1866 aa24.63■■□□□ 1.53
HOMER3-205ENST00000542541 CHD7Q9P2D1 2997 aa24.63■■□□□ 1.53
HOMER3-205ENST00000542541 CCDC172P0C7W6 258 aa24.63■■□□□ 1.53
HOMER3-205ENST00000542541 CASP14P31944 242 aa24.63■■□□□ 1.53
HOMER3-205ENST00000542541 SOX5P35711 763 aa24.63■■□□□ 1.53
HOMER3-205ENST00000542541 BPIFB4P59827 614 aa24.63■■□□□ 1.53
HOMER3-205ENST00000542541 ERVFC1P60507 584 aa24.63■■□□□ 1.53
HOMER3-205ENST00000542541 PRSS55Q6UWB4 352 aaPredicted RBP24.63■■□□□ 1.53
HOMER3-205ENST00000542541 CRYBG2Q8N1P7 616 aa24.63■■□□□ 1.53
HOMER3-205ENST00000542541 RBBP8NLQ8NC74 664 aaPredicted RBP24.63■■□□□ 1.53
HOMER3-205ENST00000542541 WHAMMQ8TF30 809 aa24.63■■□□□ 1.53
HOMER3-205ENST00000542541 BAP1Q92560 729 aa24.63■■□□□ 1.53
HOMER3-205ENST00000542541 TMEM176AQ96HP8 235 aa24.63■■□□□ 1.53
HOMER3-205ENST00000542541 KIAA1257Q9ULG3 409 aa24.63■■□□□ 1.53
HOMER3-205ENST00000542541 GOLGA6L6A8MZA4 724 aa24.62■■□□□ 1.53
HOMER3-205ENST00000542541 PAEPP09466 180 aa24.62■■□□□ 1.53
HOMER3-205ENST00000542541 DNAJB1P25685 340 aa24.62■■□□□ 1.53
HOMER3-205ENST00000542541 CA8P35219 290 aa24.62■■□□□ 1.53
HOMER3-205ENST00000542541 PTPN14Q15678 1187 aa24.62■■□□□ 1.53
HOMER3-205ENST00000542541 ZNF394Q53GI3 561 aa24.62■■□□□ 1.53
HOMER3-205ENST00000542541 RTP3Q9BQQ7 232 aa24.62■■□□□ 1.53
HOMER3-205ENST00000542541 GPR88Q9GZN0 384 aa24.62■■□□□ 1.53
HOMER3-205ENST00000542541 FNIP2Q9P278 1114 aa24.62■■□□□ 1.53
HOMER3-205ENST00000542541 IMPACTQ9P2X3 320 aa24.62■■□□□ 1.53
HOMER3-205ENST00000542541 TBC1D4O60343 1298 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 RAD23BP54727 409 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 TBX2Q13207 712 aaPredicted RBP24.61■■□□□ 1.53
HOMER3-205ENST00000542541 MAPRE1Q15691 268 aaKnown RBP24.61■■□□□ 1.53
HOMER3-205ENST00000542541 PTPROQ16827 1216 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 DCP1BQ8IZD4 617 aaKnown RBP24.61■■□□□ 1.53
HOMER3-205ENST00000542541 MRPL43Q8N983 215 aaKnown RBP24.61■■□□□ 1.53
HOMER3-205ENST00000542541 HEXIM2Q96MH2 286 aaKnown RBP24.61■■□□□ 1.53
HOMER3-205ENST00000542541 SYT15Q9BQS2 421 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 ELOVL4Q9GZR5 314 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 RXFP1Q9HBX9 757 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 HMGXB4Q9UGU5 601 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 SOX1O00570 391 aaPredicted RBP24.61■■□□□ 1.53
HOMER3-205ENST00000542541 LILRB3O75022 631 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 PTPN1P18031 435 aaKnown RBP24.61■■□□□ 1.53
HOMER3-205ENST00000542541 ACAT1P24752 427 aaKnown RBP24.61■■□□□ 1.53
HOMER3-205ENST00000542541 KRT9P35527 623 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 FXR1P51114 621 aaKnown RBP eCLIP24.61■■□□□ 1.53
HOMER3-205ENST00000542541 PTK2Q05397 1052 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 TSR1Q2NL82 804 aaKnown RBP24.61■■□□□ 1.53
HOMER3-205ENST00000542541 INTS6LQ5JSJ4 861 aaKnown RBP24.61■■□□□ 1.53
HOMER3-205ENST00000542541 SLC8B1Q6J4K2 584 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 ACOT1Q86TX2 421 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 CNGA4Q8IV77 575 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 SLC4A11Q8NBS3 891 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 B3GALNT2Q8NCR0 500 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 OR10T2Q8NGX3 314 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 AUTS2Q8WXX7 1259 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 TWNKQ96RR1 684 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 EMILIN2Q9BXX0 1053 aa24.61■■□□□ 1.53
HOMER3-205ENST00000542541 SZT2Q5T011 3432 aa24.6■■□□□ 1.53
HOMER3-205ENST00000542541 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.6■■□□□ 1.53
HOMER3-205ENST00000542541 LRRC53A6NM62 1247 aa24.6■■□□□ 1.53
HOMER3-205ENST00000542541 FSCN2O14926 492 aa24.6■■□□□ 1.53
HOMER3-205ENST00000542541 ZNF132P52740 706 aa24.6■■□□□ 1.53
HOMER3-205ENST00000542541 CAMK1Q14012 370 aa24.6■■□□□ 1.53
HOMER3-205ENST00000542541 SFMBT2Q5VUG0 894 aa24.6■■□□□ 1.53
HOMER3-205ENST00000542541 GDPD5Q8WTR4 605 aa24.6■■□□□ 1.53
HOMER3-205ENST00000542541 SYN2Q92777 582 aaPredicted RBP24.6■■□□□ 1.53
HOMER3-205ENST00000542541 ZCWPW1Q9H0M4 648 aa24.6■■□□□ 1.53
HOMER3-205ENST00000542541 NME7Q9Y5B8 376 aa24.6■■□□□ 1.53
HOMER3-205ENST00000542541 CDY1Q9Y6F8 540 aa24.6■■□□□ 1.53
HOMER3-205ENST00000542541 CDH23Q9H251 3354 aa24.6■■□□□ 1.53
HOMER3-205ENST00000542541 AKR1B15C9JRZ8 316 aaPredicted RBP24.59■■□□□ 1.53
HOMER3-205ENST00000542541 RNF225M0QZC1 329 aaPredicted RBP24.59■■□□□ 1.53
HOMER3-205ENST00000542541 CYP26A1O43174 497 aa24.59■■□□□ 1.53
HOMER3-205ENST00000542541 FERP16591 822 aa24.59■■□□□ 1.53
HOMER3-205ENST00000542541 NDUFV1P49821 464 aa24.59■■□□□ 1.53
HOMER3-205ENST00000542541 SMARCB1Q12824 385 aa24.59■■□□□ 1.53
HOMER3-205ENST00000542541 ZNF697Q5TEC3 545 aa24.59■■□□□ 1.53
HOMER3-205ENST00000542541 PLPP4Q5VZY2 271 aa24.59■■□□□ 1.53
HOMER3-205ENST00000542541 OR8K1Q8NGG5 319 aa24.59■■□□□ 1.53
HOMER3-205ENST00000542541 CLSTN3Q9BQT9 956 aa24.59■■□□□ 1.53
HOMER3-205ENST00000542541 DPEP3Q9H4B8 488 aa24.59■■□□□ 1.53
HOMER3-205ENST00000542541 C2orf71A6NGG8 1288 aa24.58■■□□□ 1.53
HOMER3-205ENST00000542541 EPOPA6NHQ4 379 aa24.58■■□□□ 1.53
HOMER3-205ENST00000542541 HCRTO43612 131 aa24.58■■□□□ 1.53
HOMER3-205ENST00000542541 GFPT2O94808 682 aa24.58■■□□□ 1.53
HOMER3-205ENST00000542541 PNMA6AP0CW24 399 aaPredicted RBP24.58■■□□□ 1.53
HOMER3-205ENST00000542541 CPB1P15086 417 aa24.58■■□□□ 1.53
HOMER3-205ENST00000542541 OR1D2P34982 312 aa24.58■■□□□ 1.53
HOMER3-205ENST00000542541 PSMC1P62191 440 aaKnown RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms