RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 CYP26A1O43174 497 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 ITGB1P05556 798 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 GALTP07902 379 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 BDNFP23560 247 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 EEF1GP26641 437 aaKnown RBP9.33□□□□□ -0.92
GGA3-202ENST00000538886 PCSK1P29120 753 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 GLUD2P49448 558 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 PDE6CP51160 858 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 ELAVL2Q12926 359 aaKnown RBP9.33□□□□□ -0.92
GGA3-202ENST00000538886 CES5AQ6NT32 575 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 TTI2Q6NXR4 508 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 SCYL2Q6P3W7 929 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 SLC39A4Q6P5W5 647 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 C16orf59Q7L2K0 433 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 LRRN4CLQ8ND94 238 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 TNIP3Q96KP6 325 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 CGRRF1Q99675 332 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 CORO1BQ9BR76 489 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 TMEM8AQ9HCN3 771 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 ACP6Q9NPH0 428 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 A0A087WUV0 522 aaPredicted RBP9.33□□□□□ -0.92
GGA3-202ENST00000538886 LLGL1Q15334 1064 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 ASIC2Q16515 512 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 CBWD6Q4V339 395 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 CBWD3Q5JTY5 395 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 CBWD5Q5RIA9 395 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 PRPF38BQ5VTL8 546 aaKnown RBP9.33□□□□□ -0.92
GGA3-202ENST00000538886 DCLRE1AQ6PJP8 1040 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 CD302Q8IX05 232 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 GPR62Q9BZJ7 368 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 THAP9Q9H5L6 903 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 SMYD3Q9H7B4 428 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 GRAP2O75791 330 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 ADH1AP07327 375 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 TIGD5Q53EQ6 642 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 OR6B2Q6IFH4 312 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 TTC30AQ86WT1 665 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 WDR49Q8IV35 697 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 LRRC8AQ8IWT6 810 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 C1orf127Q8N9H9 656 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 KAT5Q92993 513 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 SMPD4Q9NXE4 827 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 CPSF3Q9UKF6 684 aaKnown RBP9.33□□□□□ -0.92
GGA3-202ENST00000538886 CAPN7Q9Y6W3 813 aa9.33□□□□□ -0.92
GGA3-202ENST00000538886 GRM6O15303 877 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 CCL16O15467 120 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 IRF1P10914 325 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 BMPR1AP36894 532 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 PNPLA4P41247 253 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 SOX4Q06945 474 aaPredicted RBP9.32□□□□□ -0.92
GGA3-202ENST00000538886 DDR2Q16832 855 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 PPM1LQ5SGD2 360 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 CYP4A22Q5TCH4 519 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 FRMD5Q7Z6J6 570 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 C12orf29Q8N999 325 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 NT5C1AQ9BXI3 368 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 CHORDC1Q9UHD1 332 aaPredicted RBP9.32□□□□□ -0.92
GGA3-202ENST00000538886 HCRTO43612 131 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 ERLIN1O75477 346 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 GLUD1P00367 558 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 SRGAP2BP0DMP2 458 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 NDST1P52848 882 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 LILRA4P59901 499 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 DRAP1Q14919 205 aaPredicted RBP9.32□□□□□ -0.92
GGA3-202ENST00000538886 CDO1Q16878 200 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 TRIM71Q2Q1W2 868 aaKnown RBP9.32□□□□□ -0.92
GGA3-202ENST00000538886 RARS2Q5T160 578 aaKnown RBP9.32□□□□□ -0.92
GGA3-202ENST00000538886 RNF187Q5TA31 235 aaPredicted RBP9.32□□□□□ -0.92
GGA3-202ENST00000538886 SFMBT2Q5VUG0 894 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 TDRD10Q5VZ19 366 aaKnown RBP9.32□□□□□ -0.92
GGA3-202ENST00000538886 C9orf57Q5W0N0 161 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 CDCA2Q69YH5 1023 aaPredicted RBP9.32□□□□□ -0.92
GGA3-202ENST00000538886 TMEM173Q86WV6 379 aaPredicted RBP9.32□□□□□ -0.92
GGA3-202ENST00000538886 DCP1BQ8IZD4 617 aaKnown RBP9.32□□□□□ -0.92
GGA3-202ENST00000538886 SLC43A3Q8NBI5 491 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 ING5Q8WYH8 240 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 SNX27Q96L92 541 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 DUSP9Q99956 384 aaKnown RBP9.32□□□□□ -0.92
GGA3-202ENST00000538886 LPIN3Q9BQK8 851 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 NIF3L1Q9GZT8 377 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 TLR9Q9NR96 1032 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 SPATS2LQ9NUQ6 558 aaKnown RBP9.32□□□□□ -0.92
GGA3-202ENST00000538886 LINC01553A4QN01 128 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 CLDN5O00501 218 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 ATP2C2O75185 946 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 AP1G2O75843 785 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 CKMP06732 381 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 ZNF18P17022 549 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 CASP14P31944 242 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 MAP3K7CLP57077 242 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 KIRREL3Q8IZU9 778 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 SLC7A14Q8TBB6 771 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 RNF139Q8WU17 664 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 ERLEC1Q96DZ1 483 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 SYT15Q9BQS2 421 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 KCTD10Q9H3F6 313 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 ATXN3LQ9H3M9 355 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 TRAF3IP3Q9Y228 551 aa9.32□□□□□ -0.92
GGA3-202ENST00000538886 MOCS2O96007 188 aaPredicted RBP9.31□□□□□ -0.92
GGA3-202ENST00000538886 GNA15P30679 374 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms